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. Author manuscript; available in PMC: 2008 Mar 26.
Published in final edited form as: Cancer Res. 2003 Oct 15;63(20):6735–6743.

Table 4.

Identification of the COA-1-derived epitopes recognized by the CD4+ clone C111

Stimulator HLA-DRβ1 No peptide
None <8a
1869 col 0402, 1301 2186
1681 CD40LB 0301, 0402 <8
1847 CD40LB 0401, 1301 <8
Peptide concentration (μg/mM)
Peptideb 100 50 25 12.5 6.25

1681 CD40LB 0301, 0402 FSTFPPTLYQDDTLTLQAAG 105 236 69 <7.8 <7.8
1681 CD40LB TLYQDDTLTLQAAGLVPKAA 51 159 <7.8 <7.8 <7.8
1681 CD40LB DDTLTLQAAGLVPKAALLLRA 11 16 <7.8 <7.8 <7.8
1681 CD40LB LQAAGLVPKAALLLRARRAP 21 12 <7.8 <7.8 <7.8
1847 CD40LB 0401, 1301 ASAFEIFSTFPPTLYQDDTL < <7.8 <7.8 <7.8 <7.8
1847 CD40LB FSTFPPTLYQDDTLTLQAAG 226 397 296 79 <7.8
1847 CD40LB TLYQDDTLTLQAAGLVPKAA 79 326 <7.8 <7.8 <7.8
1847 CD40LB DDTLTLQAAGLVPKAALLLRA 22 33 <7.8 <7.8 <7.8
1847 CD40LB LQAAGLVPKAALLLRARRAP 52 32 <7.8 <7.8 <7.8
a

The CD4+ T-cell clone C111 was added at 2 × 104 cells/well at the final volume of 250 μl/well of ISCOVE’s plus 10% HS, and after 18 h of incubation, the supernatants were collected and the IFN-γ release was evaluated by ELISA.

b

Peptides of 20 or 21 amino acids overlapping by 15 amino acids were synthesized using the putative COA-1 protein, in the 1D8 region (1012–1318 bp). 4 × 105/ml of B cells sharing one of the DRβ1 molecules (*0402 or *1301) with the autologous tumor 1869, were incubated for 3 h at 37°C and 5% CO2 in the presence or not (−) of the peptides at the final volume of 100 μl/well in ISCOVE’s plus 10% HS.

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