Table 1. .
Rank of Most Significant |
||||||
Gene Set or Pathway | Set Size | SNP | Gene | Nominal P | FDR | FWER P |
UDP-glycotransferase activity | 89 | 59 | 41 | <.001 | .006 | .006 |
O-glycan biosynthesis | 23 | 69 | 49 | <.001 | .011 | .018 |
Note.— Two pathways (database identifiers: GO accession number 0008194 and KEGG accession number hsa00512) demonstrate statistical significance after adjustment for multiple testing, but the SNPs and genes within these pathways cannot be detected by the most-significant SNPs/genes approach.