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. Author manuscript; available in PMC: 2008 Apr 1.
Published in final edited form as: Hum Mol Genet. 2006 Dec 7;16(1):24–35. doi: 10.1093/hmg/ddl441

Figure 4.

Figure 4

Plot of distributions of standard errors of SNPs selected using different criteria. The plot illustrates that delta p^ cutoff selects preferentially SNPs with high standard errors of delta p^, regular t-test preferentially selects SNPs with low standard errors and the corrected t-test is centered on the standard error distribution from all SNPs.