TABLE 4.
Putative QTL for percentage of visually sprouted seeds (VI) and whole spike (SI), using the composite interval-mapping method in a BC1F7 population involving Syn37 and Janz (Syn37/2*Janz), with seed derived from field trials in 2004 (Horsham, Victoria) and 2005 (Horsham and Wongan Hills, western Australia) and the mean across the three environments
| QTL and its location | Closest markers | Mean over two environments
|
Horsham-2004
|
Horsham-2005
|
||||||
|---|---|---|---|---|---|---|---|---|---|---|
| LOD | R2 (%) | Additive | LOD | R2 (%) | Additive | LOD | R2 (%) | Additive | ||
| VI | ||||||||||
| QPhs.dpivic-3D.1 | RGC | 16 | 17 | −12.98 | 13 | 15 | −13.06 | 10 | 13 | −12.09 |
| QPhs.dpivic-3D.1 | wms1200 | 15 | 15 | −13.08 | 12 | 14 | −13.04 | 10 | 12 | −12.44 |
| QPhs.dpivic-3D.2 | gwm341 | 3 | 3 | −5.40 | 2 | 3 | −5.24 | ND | ND | ND |
| QPhs.dpivic-4A.1 | gwn269c | 17 | 21 | −15.04 | 10 | 14 | −13.25 | 13 | 17 | −14.73 |
| QPhs.dpivic-4A.2 | wms894 | 18 | 24 | −14.03 | 13 | 18 | −13.21 | 12 | 17 | −12.85 |
| SI | ||||||||||
| QPhs.dpivic-3D.1 | gwm3 | 6 | 8 | −0.36 | 4 | 7 | −0.28 | 5 | 7 | −0.43 |
| QPhs.dpivic-3D.1 | wms1200 | 3 | 4 | −0.26 | 2 | 3 | −0.47 | 2 | 3 | −0.30 |
| QPhs.dpivic-4A.1 | gwn269c | 7 | 10 | −0.39 | 4 | 6 | −0.41 | 7 | 11 | −0.52 |
| QPhs.dpivic-4A.2 | wms894 | 9 | 12 | −0.39 | 6 | 9 | −0.45 | 6 | 10 | −0.44 |
VI, visual index; SI, sprouting index; ND, not detected.