TABLE 2.

Relative expression between strains and between alleles

Gene	Genotypea	log2 (In/zhr)b	95% C.I.	t-valuec	d.f.	P-value
CG10501	F	−0.686	0.526	−3.193	6	0.019
	P	0.031	0.530	0.141	6	0.892
	B	0.053	0.128	1.060	5	0.338
	H	−0.027	0.091	−0.755	5	0.484
	R	−0.043	0.128	−0.857	5	0.431
CG1644	F	−0.381	0.193	−4.836	6	0.003
	P	−0.447	0.189	−5.797	6	0.001
	B	−0.443	0.281	−4.053	5	0.010
	H	−0.661	0.199	−8.556	5	0.000
	R	−0.460	0.281	−4.208	5	0.008
CG18228	F	0.656	0.295	5.440	6	0.002
	P	1.680	0.293	14.010	6	0.000
	B	−0.229	0.150	−3.934	5	0.011
	H	−0.231	0.106	−5.608	5	0.002
	R	−0.206	0.150	−3.526	5	0.017
CG5506	F	−0.479	0.629	−1.863	6	0.112
	P	0.420	0.633	1.624	6	0.156
	B	−0.068	0.491	−0.356	5	0.736
	H	0.287	0.347	2.130	5	0.086
	R	−0.146	0.491	−0.767	5	0.478
CG6206	F	−0.003	0.134	−0.050	6	0.961
	P	−0.038	0.137	−0.686	6	0.518
	B	−0.048	0.119	−1.031	5	0.350
	H	−0.107	0.084	−3.287	5	0.022
	R	−0.100	0.119	−2.156	5	0.084
CG6462	F	0.028	0.346	0.198	6	0.850
	P	0.658	0.325	4.958	6	0.003
	B	0.552	0.160	8.887	5	0.000
	H	0.404	0.113	9.198	5	0.000
	R	0.465	0.160	7.479	5	0.001
CG6600	F	−0.121	0.305	−0.971	6	0.369
	P	0.409	0.305	3.282	6	0.017
	B	−0.194	0.286	−1.744	5	0.142
	H	−0.115	0.202	−1.460	5	0.204
	R	−0.106	0.286	−0.957	5	0.383
CG8707	F	0.264	0.151	4.272	6	0.005
	P	0.268	0.151	4.336	6	0.005
	B	0.201	0.235	2.197	5	0.079
	H	0.179	0.166	2.772	5	0.039
	R	0.024	0.235	0.260	5	0.805

^aGenotype designations (F, I, B, H, and R) are diagrammed in Figures 1 and 2 of the main text.

^blog₂(In/zhr) are the least-squares (LS) means from the mixed linear model described in legends of Figures 1 and 2. The next column shows the 95% confidence intervals for each LS means.

^ct-values, degrees of freedom (d.f.), and P-values correspond to a t-test (H₀:LS means = 0) performed within proc MIXED using SAS v. 8.2.