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. 2004 Jul;13(7):1811–1822. doi: 10.1110/ps.04629604

Table 1.

Geometry of engineered disulfide bonds

χ1 χ2 χ3 χ′2 χ′1 Cα-Cα Cβ-Cβ Energy (kcal/mole)a
1hpu Cb1 −44.3 −136.5 90.9 95.8 42.7 5.83 3.95 3.10
    2 −147.2 120.4 −109.6 157.3 41.9 5.83 3.95 5.49
    3 −145.0 65.9 112.3 −155.7 156.7 5.83 3.95 5.55
5′NT-C chain A −103.6 169.2 −78.1 −126.0 −60.3 6.11 3.60 11.69
5′NT-C chain B −91.9 177.5 −94.0 −120.6 −62.1 6.16 3.59 8.91
1hp1c −73.35 66.3 127.6 −83.5 −146.1 5.60 4.39 5.47
5′NT-O1 chain A −67.4 178.6 −96.2 74.5 −158.1 5.29 4.22 9.77
5′NT-O1 chain B −70.4 174.3 −94.7 78.2 −166.4 5.35 4.13 4.04
5′NT-O2 −65.3 65.4 108.2 −80.4 −149.8 5.27 4.24 4.69

a Total energy of the energy bond according to the algorithm of Hazes and Dijkstra (1988).

b 1hpu C: chain C of PDB ID 1hpu used as model for the most closed form of bacterial 5′NT, three possible conformations were predicted.

c 1hp1 PDB ID for the most open form of bacterial 5′NT