Table 1.
Circular dichroism data
Peptide | Cassette designationa | [Θ]222nm (benign)b | [Θ]222nm (50% TFE)b | [Θ]222/208 nm (benign)c | [Θ]222/208 nm (50% TFE)c | % Helixd |
1 | ••• | −28,700 | −31,100 | 1.05 | 0.96 | 92.3 |
2 | ••○ | −28,400 | −30,000 | 1.01 | 0.92 | 94.7 |
3 | ○•• | −33,100 | −32,100 | 1.03 | 0.93 | 103.1 |
4 | •○• | −26,900 | −29,600 | 1.01 | 0.94 | 90.9 |
5 | •○○ | −29,000 | −32,300 | 1.02 | 0.94 | 89.8 |
6 | ○•○ | −35,400 | −34,600 | 1.05 | 0.92 | 102.3 |
7 | ○○• | −28,300 | −32,500 | 1.00 | 0.93 | 87.0 |
8 | ○○○ | −28,200 | −32,600 | 1.00 | 0.92 | 86.5 |
a Sequences are shown in Figure 2 ▶. Filled circles denote Ile or Leu and open circles denote Ala in the a and d positions of the cassette shown in Figure 2 ▶.
b Calculated from the following formula: [Θ] = Θobs × MRW / [10 × path length (cm) × concentration (mg/mL)] where MRW is the mean residue weight (molecular mass of the peptide divided by the number of helical residues). Benign refers to 50 mM potassium phosphate buffer, 0.1 M KCl (pH 7.0), and TFE is trifluoroethanol.
c [Θ]222/208 nm is the ratio of the [Θ]222 divided by the [Θ]208nm.
d % Helix is calculated from the molar ellipticity at 222 nm divided by the molar ellipticity in 50% TFE times 100. The value in 50% TFE represents the maximum α-helical content and is taken as 100%.