Table 2.
Proteins | PDB code | Size of NS | Size of TS | Log kf | TCD(N) |
Villin 14T | 2VIKa | 126 | 18 | 2.95 | 0.97 |
Ribosomal protein L9 | 1DIVb | 56 | 14 | 2.86 | 0.88 |
FKBP12 | 1FKBa | 107 | 23 | 0.63 | 1.30 |
Ubiquitin | 1UBOa | 76 | 16 | 3.18 | 1.07 |
Procarboxipeptidase A2 | 1PBAa | 81 | 21 | 2.95 | 1.08 |
McrP | 2HQIb | 72 | 30 | 0.08 | 1.48 |
U1A | 1URNa | 96 | 18 | 2.49 | 1.20 |
HPr | 1HDNa | 85 | 25 | 1.17 | 1.35 |
Tendamistat | 2AITa | 75 | 26 | 1.82 | 1.42 |
CspA | 1MJCa | 69 | 15 | 2.28 | 1.14 |
CspB | 1CSPa | 67 | 19 | 3.03 | 1.10 |
Twitchin | 1WITb | 93 | 33 | 0.18 | 1.48 |
Titin | 1TITb | 89 | 17 | 1.51 | 1.26 |
FN_III | 1FNF_10a | 94 | 22 | 2.37 | 1.14 |
FN_III | 1FNF_9a | 90 | 36 | −0.40 | 1.30 |
α-spectrin SH3 domain | 1SHGc | 57 | 15 | 0.61 | 1.35 |
Src SH3 domain | 1FMK | 57 | 21 | 1.54 | 1.28 |
Sso SH3 domain | 1BF4 | 64 | 14 | 3.02 | 0.88 |
PI3 SH3 domain | 2PNI | 86 | 20 | −0.46 | 1.21 |
Fyn-SH3 domain | 1NYFa | 58 | 16 | 1.97 | 1.22 |
E2P | 2PDDb | 43 | 7 | 4.25 | 0.75 |
Im9 | 1IMQb | 86 | 14 | 3.17 | 0.93 |
ACBP | 2ABDa | 86 | 14 | 2.84 | 1.04 |
Monomeric λ-repressor | 1LMBa | 79 | 14 | 3.69 | 0.75 |
CD2 | 1HNGb | 98 | 19 | 1.26 | 1.25 |
N-Ribosomal/Protein L9 | 1CQU | 56 | 14 | 2.95 | 0.91 |
Cyt. c | 1HRCa | 104 | 14 | 3.08 | 0.84 |
Rd-apocyt b562 | 1M6T | 106 | 16 | 3.70 | 0.81 |
CI2 | 1COAa | 64 | 22 | 1.75 | 1.14 |
Protein L | 2PTLa | 62 | 14 | 1.78 | 1.13 |
Protein G | 3GB1 | 56 | 20 | 2.60 | 1.10 |
mAcP | 1APSa | 98 | 32 | −0.64 | 1.52 |
TNfn3 | 1TENa | 90 | 24 | 0.46 | 1.24 |
WW domain | 1PIN | 34 | 16 | 4.11 | 0.95 |
Protein A B-domain | 1BDC | 60 | 10 | 5.08 | 0.71 |
Engrailed homeodomain | 1ENH | 54 | 12 | 4.57 | 0.83 |
Villin head piece | 1VII | 36 | 12 | 4.34 | 0.67 |
Barnase | 1A2P | 108 | 18 | 1.11 | 0.86 |
Ribosomal protein S6 | 1RIS | 97 | 19 | 2.61 | 1.33 |
NTL9 (1–39) | 1COU_1_39 | 39 | 15 | 3.13 | 1.51 |
β-hairpin (41–56) | 3GB1 | 16 | 10 | 5.39 | 0.89 |
a From Jackson (1998).
b From H. Zhou and Zhou (2002).
c References: β-hairpin (Munoz et al. 1997); 1RIS (Miller et al. 2002); T9 to D65 for src-SH3 domain (Riddle et al. 1999); E15 to F76 for protein I (Kim et al. 2000), 1 to 39 for NTL9 (1–39) (Horng et al. 2003); G1326 to T1415 for 1FNF_9 and Vall416 to T1509 for 1FNF_10 (Plaxco et al. 1997); SH3-PI3 (Guijarro et al. 1998); 1A2P (Chu and Bai 2002); 1CQU (Luisi and Raleigh 2000); 1M6T (Chu et al. 2002); 1PIN (Jager et al. 2001); 1BDC (Myers and Oas 2001); IVII (Wang et al. 2003); 1ENH (Mayor et al. 2003); 3GB1 (McCallister et al. 2000); 1BF4 (Guerois and Serrano 2000); 1SHG (Martinez et al. 1999).