Table 7.
Fruit ripening genes which respond to ethylene
| Apple Genbank acc. | Putative Annotationa | Apple Genbank acc. | Putative Annotationa |
| Ripening sub-cluster R1 | |||
| EB118159 | Short chain dehydrogenase/reductase (SDR) | EB140551 | Hypothetical protein |
| CN860849 | Ceramide kinase | CN906574 | Senescence associated protein |
| CN870499 | Hypothetical protein | EB122632 | Thaumatin protein |
| EB127428 | LEA family protein | CN911315 | DNA binding bromodomain protein |
| CN895403 | Integral membrane family protein | EB151414 | Major latex protein (MLP) |
| Ripening sub-cluster R2 | Ripening sub-cluster R3 | ||
| EB106359 | Hypothetical protein | CN932083 | Chloroplast 50S ribosomal protein L22 |
| CN862135 | Hypothetical protein | CN860052 | 5-oxoprolinase |
| EB114937 | β-glucosidase precursor | CN860296 | Hypothetical protein |
| CN862240 | Transaldolase ToTAL2 | CN862389 | Stress-responsive protein |
| EB116078 | (S)-acetone-cyanohydrin lyase | CN864680 | (S)-2-hydroxy-acid oxidase |
| EB118291 | Mannitol dehydrogenase | CN851072 | Calcineurin B-like protein |
| CN849429 | Hypothetical protein | EB121320 | Ribosomal protein |
| CN863631 | Sugar transporter | CN886293 | Isoflavone reductase |
| EB117418 | (1–4)-β-mannan endohydrolase | EB135086 | Carbonic anhydrase |
| CN864737 | DNA polymerase III polC-type | EB126988 | C2H2-type zinc finger protein |
| EB115757 | Flavonol synthase | CN939170 | Glycerol-3-phosphate dehydrogenase |
| EB121772 | Hypothetical protein | CN939718 | Sad1/unc-84 protein |
| CN887217 | Hypothetical protein | CN890306 | Transaldolase protein |
| CN890755 | CBL-interacting protein kinase | EB137446 | Cytochrome P450 |
| EB135512 | F-box family protein | CN894690 | NADH dehydrogenase |
| CN893578 | C-4 methyl sterol oxidase | EB137890 | S-adenosylmethionine synthetase |
| CN889902 | Auxin/aluminum-responsive | CN895673 | 2-oxoisovalerate dehydrogenase |
| CN895410 | Hypothetical protein | EB138408 | Hypothetical protein |
| CN895502 | Vacuolar sorting receptor | EB140312 | Ribose-5-phosphate isomerase A |
| EB138209 | Xyloglucan endotransglycosylase | EB142251 | Pectinacetylesterase |
| EB138429 | LEA family protein | CN941807 | DEAD box RNA helicase |
| CN940062 | Harpin induced protein (HIN1) | CN943134 | Hypothetical protein |
| EB139752 | Seed storage/lipid transfer protein | EB129495 | Stress-responsive protein |
| EB139896 | Auxin-responsive protein | CN943168 | Tubulin |
| EB128540 | Profilin | EB129522 | MYB transcription factor |
| CN943110 | Syntaxin | CN945056 | Hypothetical protein |
| EE663937 | Ethylene receptor (EIN4/ETR2) | CN883038 | Hypothetical protein |
| EB140933 | 6-phosphogluconolactonase | EB150480 | Haloacid dehalogenase hydrolase |
| EB141282 | Lipoxygenase | EE663647 | Hypothetical protein |
| CN901620 | Hypothetical protein | EG631194 | S-adenosyl-L-methionine:carboxyl methyltransferase protein |
| EB144781 | Lipid transfer protein | CN876100 | SCARECROW gene regulator |
| EB148006 | Fimbrin protein (FIM1) | CN877052 | Hypothetical protein |
| EG631181 | Thaumatin protein | CN878203 | Copine I protein |
| EG631195 | Transferase family protein | CN902180 | Amidase protein |
| EG631213 | β-amylase | CN902277 | Hypothetical protein |
| EB157538 | Hypothetical protein | CN902592 | Heavy-metal associated domain-containing protein |
| CN875931 | tatD deoxyribonuclease family | CN911536 | Hypothetical protein |
| EG631252 | UDP-glucoronosyl/UDP-glucosyl transferase | EB154218 | MADS-box protein |
| EE663809 | Pyruvate kinase | CN914798 | Hypothetical protein |
| CN912930 | Pentatricopeptide repeat protein | CN914935 | MATE efflux protein |
| CN913545 | Hypothetical protein | CN914950 | 2OG-Fe(II) oxygenase family protein |
| CN909301 | Hypothetical protein | CN917878 | H(+)-transporting ATPase |
| CN917441 | Dormancy/auxin associated | EE663837 | Hypothetical protein |
| EB152801 | Xyloglucan endotransglycosylase | CN916212 | AAA-type ATPase family protein |
| CN915067 | Sugar transporter family protein | CN916137 | Phytase |
| CN915323 | Hypothetical protein | EB153327 | Isocitrate lyase |
| EE663891 | Polygalacturonase | CN915191 | Alcohol dehydrogenase |
| EG631317 | Cytochrome P450 | EG631278 | Cytochrome P450 |
Apple genes for which expression changed in response to ethylene treatment of mature apple fruit from an ACC oxidase knockout plant [22] which also had significantly altered expression during fruit ripening in the fruit development array.
a Annotation of the apple genes, based on BLAST comparison of genes with public databases.