Specify order of preprocessing operations
Describe any data quality control measures
Unwarping of B0 distortions
Slice timing correction
Reference slice and type of interpolation used (e.g., “Slice timing correction to the first slice as performed, using SPM5's Fourier phase shift interpolation”)
Motion correction
Reference scan, image similarity metric, type of interpolation used, degrees-of-freedom (if not rigid body) and, ideally, optimization method, e.g., “Head motion corrected with FSL's MCFLIRT by maximizing the correlation ratio between each timepoint and the middle volume, using linear interpolation.”
Motion susceptibility correction used