Table 5. Interface residues of APEX1 and pol-β in the 5′ complex.
Residues in APEX1 | Interface Area (percentage) | Residues in pol-β | Interface Area (percentage) |
Glu101 | 0–6 | Arg283 | 6–10 |
Asn102 | 0–5 | Leu287 | 5–8 |
Ser120 | 0–5 | Glu288 | 0–8 |
Ala121 | 0–6 | Lys289 | 1–7 |
Ser123 | 5–11 | Phe291 | 0–5 |
Asp124 | 12–14 | Thr292 | 3–6 |
Lys125 | 6–10 | Asn294 | 2–5 |
Glu126 | 2–6 | Arg299 | 0–7 |
Tyr144 | 0–8 | Leu301 | 5–12 |
Glu149 | 0–6 | Gly302 | 3–5 |
Glu150 | 0–7 | Val303 | 13–18 |
Asp152 | 3–6 | Thr304 | 5–14 |
Gln153 | 12–17 | Gly305 | 3–8 |
Glu154 | 0–5 | Val306 | 13–18 |
Gly155 | 5–8 | ||
Val157 | 4–7 | ||
Arg181 | 0–5 |
The residues assembling the majority of the interface are highlighted in bold. The column “Interface Area” displays range of interface area represented by a residue during MD simulation (see Table 4).