Table 3.
Estimation of the binding and gating interaction
| Site | Ωbinding | ΔGbinding (kcal mol−1) | Ωgating | ΔGgating (kcal mol−1) |
|---|---|---|---|---|
| δW57 | 1.3 | 0.2 | 1.0 | 0 |
| δD59 | 0.5 | −0.4 | 0.3 | −0.7 |
| ɛG57 | 2.0 | 0.4 | 1.3 | 0.1 |
The coupling coefficient (Ω) and interaction free energy changes (ΔG) between the tailgroup of ACh and the δ57, δ59 and ɛ57 sites. The Ω and ΔG were calculated separately for the agonist binding process and the channel gating. Ω was calculated as (Kwild type- Ach X Kmutant-TMA)/ (Kmutant-ACH X Kwild-type-TMA) where k refers to the binding equilibrium constant KD (k-/k+) or the gating equilibrium constant Θ(β/α). ΔG was calculated as 0.59 In (Ω).