Table 2.

Expression of transcriptionally and translationally regulated genes 6 h after acute muscle contractions

	P value				Average fold change
	1h		6h		1h		6h
Probe set accession number	Polysome	Total	Polysome	Total	Polysome	Total	Polysome	Total	Gene description
Translational regulation
X71898_at	—	—	5.7×10−6	—	—	—	14.6	—	uPAR-1
U02553cds_s_at	—	2.2×10−2	9.6×10−4	—	—	10.8	8.4	—	MAP kinase phosphatase
rc_AI176710_at	—	1.4×10−2	2.5×10−8	—	—	4.2	7.2	—	NOR-1
rc_AA859648_at	—	—	7.6×10−5	—	—	—	6.8	—	AA859648 similar to mouse heat shock protein 40
M19651_at	—	—	5.8×10−4	—	—	—	6.7	—	Fra-1
M61875_at	—	—	8.1×10−4	—	—	—	5.8	—	CD44
L32591mRNA_g_at	—	—	2.6×10−5	—	—	—	5.4	—	GADD45
L32591mRNA_at	—	—	2.5×10−4	—	—	—	5.4	—	GADD45
rc_AI014163_at	—	4.0×10−2	1.8×10−3	—	—	1.9	4.4	—	PC4
rc_AI169756_s_at	—	3.3×10−4	2.6×10−4	—	—	2.6	3.1	—	Gene 33
AJ006295_at	—	—	7.2×10−8	—	—	—	2.9	—	AF-9
rc_AA997968_at	—	—	6.6×10−4	—	—	—	2.8	—	RNB6
S56464mRNA_at	—	2.6×10−2	6.1×10−4	—	—	1.8	2.6	—	Hexokinase II
D26393exin_s_at	—	—	1.5×10−4	—	—	—	2.5	—	Hexokinase II
rc_AA799396_g_at	—	—	2.7×10−4	—	—	—	2.5	—	AA799396 EST
X86003_at	—	1.2×10−4	7.4×10−4	—	—	9.3	2.5	—	Neuron-derived orphan receptor-2(NOR-2)
D86711_at	—	—	2.5×10−4	—	—	—	2.3	—	D86711 c DNA
U75899Mrna_at	—	—	2.9×10−4	—	—	—	2.2	—	HSPB2
D90404_g_at	—	—	9.0×10−4	—	—	—	−2.6	—	Cathepsin C
J04035_at	—	—	5.0×10−4	—	—	—	−2.2	—	Tropoelastin
rc_AA85955_at	—	—	9.1×10−4	—	—	—	−2.2	—	Eukaryotic elongation factor 2 kinase (Eef2k)
D86039_g_at	—	2.6×10−2	3.5×10−4	—	—	−2.2	−2.1	—	ATP-sensitive inwardly rectifying K+ channel, BIR(Kir6.2)
Transcriptional and translational regulation
X06769cds_at	—	4.5×10−3	6.5×10−4	3.7×10−2	—	43.6	33.9	29.7	c-fos
X06769cds_g_at	—	4.3×10−3	1.6×10−4	1.3×10−2	—	13.5	9.3	10.0	c-fos
X03347cds_g_at	—	6.7×10−3	3.3×10−4	5.9×10−2	—	12.3	6.9	10.2	FBR-murine osteosarcoma provirus
Z75029_s_at	3.3×10−3	2.1×10−2	3.7×10−5	2.0×10−2	8.8	9.8	26.4	8.8	HSP70
L12025_at	—	—	1.4×10−4	5.0×10−4	—	—	23.8	10.9	Tumour-associated glycoprotein E4 (Tage4)
U50736_s_at	—	—	1.8×10−4	6.8×10−4	—	—	19.8	10.5	CARP
M63282_at	—	1.9×10−3	9.1×10−5	1.8×10−3	—	9.4	16.5	7.7	Activating transcription factor 3(Atf3)
rc_AA800551_at	4.0×10−4	—	2.5×10−5	1.9×10−2	4.3	—	12.7	4.3	AA800551 similar to mouse DNAJ-like 2
M60921_at	—	7.2×10−3	1.1×10−4	1.5×10−2	—	11.3	10.8	5.9	PC3
rc_AA944156_s_at	—	5.4×10−3	4.1×10−5	9.0×10−3	—	6.0	5.3	5.4	PC3
M60921_g_at	—	5.7×10−3	9.5×10−6	2.7×10−2	—	8.8	5.3	3.2	PC3
rc_AA819776_f_at	6.8×10−4	4.2×10−2	7.1×10−4	9.4×10−3	8.4	1.8	10.3	8.4	Similar to mouse Hsp86-1
L35271_at	—	—	1.3×10−4	7.4×10−3	—	—	10.2	2.0	AML1
L05489_at	—	1.6×10−2	5.5×10−4	3.4×10−2	—	6.7	9.4	7.0	Heparin-binding EGF-like growth factor
U75397UTR#1_s_at	—	2.0×10−3	8.8×10−4	4.9×10−3	—	29.1	8.8	21.7	Egr1
AF023087_s_at	—	2.7×10−3	6.3×10−4	1.9×10−3	—	15.7	6.8	10.9	Egr1
rc_AA893280_at	—	—	5.0×10−4	1.7×10−3	—	—	8.4	2.3	AA893280 EST
rc_AI176546_at	1.6×10−3	1.4×10−2	1.9×10−6	8.3×10−3	3.9	2.3	6.6	3.9	HSP86
rc_AA894318_at	—	—	1.1×10−4	4.4×10−2	—	—	6.5	12.3	AA894318 EST
X92.069_at	—	—	4.9×10−5	5.5×10−3	—	—	6.4	3.1	P2X5
rc_AI043631_s_at	—	—	2.5×10−4	1.5×10−2	—	—	5.6	2.9	Antizyme inhibitor
D89983_at	—	3.2×10−2	1.7×10−7	2.3×10−2	—	1.5	4.0	−1.1	Antizyme inhibitor
U53922_at	4.3×10−3	—	2.0×10−6	1.6×10−2	2.6	—	5.1	2.6	Dnaj-like protein (RDJI)
rc_AA799773_at	—	2.4×10−3	8.6×10−5	3.9×10−4	—	2.3	5.1	2.4	AA799773 EST
rc_AA799396_at	—	—	2.5×10−5	2.5×10−3	—	—	5.0	5.4	AA799396 EST
rc_AA859827_at	—	—	6.2×10−4	1.1×10−3	—	—	5.0	8.9	AA859827 similar to mouse uridine-cytidine kinase 2
rc_AA799330_at	—	—	2.3×10−9	1.9×10−2	—	—	4.9	1.9	AA799330 EST similar to mouse Pelota
X81193_at	—	—	1.2×10−4	4.9×10−3	—	—	4.9	4.3	Muslce LIM
rc_AA799773_g_at	—	4.8×10−3	2.4×10−4	3.9×10−2	—	2.0	4.6	2.5	AA799773 EST
rc_AA892333_at	—	—	6.5×10−4	1.4×10−2	—	—	4.4	4.6	Alpha-tubulin
rc_AI070295_at	—	—	9.5×10−4	5.6×10−3	—	—	4.2	1.5	AI070295 similar to Mouse Gadd45
rc_AI070295_g_at	—	—	1.7×10−4	1.7×10−1	—	—	4.4	1.7	AI070295 similar to Mouse Gadd45a
XI7053cds_s_at	9.9×10−2	1.8×10−2	1.7×10−2	8.1×10−5	2.2	1.6	3.9	2.2	Immediate-early serum responsive JE.
AF020618_g_at	—	—	2.3×10−2	4.6×10−4	4.4	4.7	3.8	4.4	Progression elevated gene 3
U78102_at	—	3.9×10−5	4.4×10−4	4.7×10−3	—	7.8	3.5	3.8	Egr2 (krox20)
U03416_at	—	—	2.3×10−6	9.1×10−3	—	—	3.5	4.9	Neuronal olfactomedin-related ER localized protein (D2Sutle)
AF036548_g_at	—	—	7.0 ×10−5	8.5×10−3	—	—	3.1	2.6	RGC-32
AF036548_at	—	—	2.0×10−4	3.4×10−3	—	—	10.0	2.8	RGC-32
U17837cds_at	—	—	1.2×10−4	2.1×10−3	—	—	2.9	3.2	Zinc finger protein RIZ
Y00396mRNA_g_at	—	4.4 × 4 10−2	5.3 × 10−4	2.8 × 10−2	—	1.7	2.8	1.6	c-myc
AJ006295_g_at	2.2×10−2	—	1.7×10−7	6.×10−3	2.2	—	2.7	2.2	AF-9
rc_AA892635_at	—	—	1.9×10−4	3.8×10−3	—	—	2.7	1.4	ras-like protein (Tc10)
M64733mRNA_s_at	9.9×10−2	—	2.5×10−4	3.4×10−3	1.8	—	2.5	1.8	TRPM-2
ABoo3726_at	—	—	1.9×10−6	4.0×10−3	—	—	2.3	3.1	Vesl
M84176_at	3.2×10−2	—	1.4×10−4	1.7×10−2	1.6	—	2.3	1.6	MyoD
rc_AI639058_s_at	5.0×10−2	—	4.5×10−4	3.1×10−2	2.8	—	2.3	2.8	AI639058 cDNA
X05566_i_at	—	—	7.7×10−5	1.1×10−2	—	—	2.3	2.0	Myosin regulatory light chain (RLC)
rc_AI639444_g_at	8.2×10−3	—	1.9×10−6	1.0×10−1	3.0	—	2.5	3.0	Sarcosin
rc_AI639444_at	3.9×10−4	—	4.4×10−6	1.0×10−3	3.0	—	2.2	3.0	Sarcosin
rc_AA799545_at	—	—	1.1×10−5	4.8×10−3	—	—	2.2	1.8	AA799545 similar to mouse chaperonin subunit 3, gamma
rc_AA9455867_at	—	7.6×10−3	3.2×10−5	2.2×10−2	—	4.0	2.2	1.7	c-jun
rc_AA891107_at	—	—	6.4×10−4	1.1×10−2	—	—	2.2	2.7	Diphosphoinositol polyphosphate phosphohydolase type II (Nudt4)
U95001UTR#1_s_at	—	—	2.9×10−4	1.8×10−3	—	—	2.1	1.7	Developmentally-regulated cardiac factor (DRCF-5)
rc_AI011498_at	—		9.7×10−4	2.0×10−2	—	—	−7.7	−2.4	BAF60b
M26715_at	—	—	1.5×10−5	4.5×10−3	—	—	−3.8	−1.2	Phosphodiesterase 4A (Pde4a)
rc_AA859631_at	4.7×10−2	—	5.2×10−4	5.8×10−3	−1.6	—	−3.3	−1.6	AA859631 ESt
rc_AI639108_at	—	—	1.3×10−4	2.7×10−2	—	—	−2.4	−2.3	AI639108 ESt
rc_AI639507_at	3.1×10−4	6.3×10−3	5.6×10−4	4.0×4 10−2	−1.6	−2.0	−2.4	−1.6	AI639507 cDNa
U69272_at	—	—	1.9×10−4	2.3×10−3	—	—	−2.1	−2.0	Interleukin-15