Table 2.
Real test datasets. Four datasets for the M. succiniciproducens genome and one for the V. vulnificus genome were tested with ConPath. MP: mate-pair, MPIC: mate-pair in the same contigs.
| Data name | Number of contigs | Number of MPs | Number of MPICs | Average size of MP(fosmid)s |
|---|---|---|---|---|
| MH1 | 98 | 238 | 72 | 37,673 bp |
| MH2 | 86 | 240 | 115 | 38,102 bp |
| MH3 | 85 | 240 | 120 | 38,157 bp |
| MH4 | 112 | 240 | 108 | 37,917 bp |
| VV | 334 | 1,220 | 454 | 33,024 bp |