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. 2008 Feb 26;8:61. doi: 10.1186/1471-2148-8-61

Table 1.

Main structural features of the five mt genomes sequenced anew in this study. For each, total size of the mt genome, overall base composition, size and base composition of the potential origin of replication (POR), size of rRNAs, size of intergenic spacers, and size of the protein coding genes (showing start/stop codons within parentheses) are presented. Sizes are expressed as bp.

P. dolabrata A. fragilis S. pectinata O. celtica M. myosotis
total size 13,856 14,745 14,065 14,150 14,246
% A 27.44 30.12 29.76 25.26 23.67
% T 35.97 36.93 37.06 34.06 31.35
% C 16.97 15.13 14.92 18.92 21.35
% G 19.6 17.82 18.26 21.77 23.63
% A+T 63.41 67.05 66,82 59.32 55.02
POR size 42 52 53 43 45
% A+T POR 83.33 86.54 73.58 76.74 60.00
l-rRNA 998 1,095 1,022 1,056 1,089
s-rRNA 695 738 693 708 712
Intergenic spacers 89 644 229 295 311
atp6 640 (ATG/T) 660 (ATA/TAA) 663 (TTG/TAG) 645 (TTG/TAG) 641 (ATA/TA)
atp8 163 (ATG/T) 156 (TTG/TAG) 149 (ATG/TA) 147 (ATG/TAA) 151 (ATG/T)
cob 1,111 (TTG/T) 1,122 (TTG/TAA) 1,113 (TTG/TAA) 1,122 (ATT/TAA) 1,110 (TTG/TAG)
cox1 1,525 (TTG/T) 1,530 (TTG/TAA) 1,528 (TTG/T) 1,527 (TTG/TAG) 1,527 (ATG/TAA)
cox2 649 (TTG/T) 684 (TTG/TAA) 665 (TTG/TA) 681 (TTG/TAA) 669 (GTG/TAA)
cox3 778 (ATG/T) 778 (ATG/T) 778 (ATG/T) 778 (ATG/T) 778 (ATG/T)
nad1 876 (ATT/TAA) 915 (TTG/TAG) 886 (TTG/T) 906 (TTG/TAA) 882 (ATT/TAG)
nad2 925 (ATT/T) 942 (ATA/TAA) 935 (TTG/TA) 922 (ATG/T) 948 (ATG/TAG)
nad3 351 (TTG/TAA) 354 (TTG/TAG) 350 (ATG/TA) 352 (ATG/T) 335 (ATA/T)
nad4 1,332 (TTG/TAA) 1,322 (TTG/TA) 1,328 (TTG/TAA) 1,308 (GTG/TAA) 1,305 (TTG/TAA)
nad4L 271 (ATA/T) 283 (ATG/T) 283 (GTG/T) 268 (ATG/T) 291 (TTG/TAA)
nad5 1,644 (ATA/TAG) 1,627 (GTG/T) 1,665 (TTG/TAG) 1,643 (GTG/TAG) 1,656 (GTG/TAG)
nad6 483 (ATT/TAG) 471 (TTG/TAA) 459 (TTG/TAA) 465 (TTG/TAA) 468 (ATA/TAG)