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. 2006 Apr;17(2):138–144.

TABLE 1.

DNA Sequencing Reaction Conditions Used to Generate the Top Three Quality Scores for Templates A, B, and C by Instrument

Template Instrumenta Rank Quality Score (q20) WTR Length (cm)b Primer (pmol) Template (μg) Reaction Volume (μl) DNA Sequencing Chemistryc
A 377 1 837 48 3.2 300 20 BDTv3.1
2 713 48 15.0 1140 40 BDTv3.1
3 690 48 3.2 300 20 BDT v3.1
3100 1 815 80 12.5 380 10 BDTv3.1
2 765 80 5.0 630 20 BDTv3.1
3 765 80 3.2 494 20 BDTv1.1
3700 1 767 50 10.0 200 10 BDTv3.1
2 715 50 10.0 200 10 BDTv3.1
3 708 50 10.0 200 10 BDTv3.1
B 377 1 951 48 4.8 400 20 dGTpv3.0
2 856 48 3.2 300 20 BDTv3.1
3 793 48 5.0 800 20 dGTpv3.0
3100 1 879 80 5.0 730 20 BDTv3.0:dGTpv3.0 (4:1)
2 871 80 3.2 494 20 BDTv3.0:dGTpv2.0 (2:1)
3 854 80 5.0 730 20 dGTpv3.0
3700 1 784 50 4.0 200 15 BDTv3.1
2 767 50 3.5 365 10 BDTv3.1
3 758 50 3.5 365 10 BDTv3.0
C 377 1 908 48 4.8 400 20 dGTpv3.0
2 820 48 3.2 300 20 BDTv3.1
3 729 48 15.0 2550 40 dGTpv3.0
3100 1 881 80 5.0 850 20 dGTpv3.0
2 844 80 5.0 850 20 BDTv3.0:dGTpv3.0 (4:1)
3 835 80 3.2 494 20 BDTv3.0:dGTpv2.0 (2:1)
3700 1 805 50 10.0 400 10 BDv3.1
2 788 50 10.0 400 10 dGTp v3.0
3 777 50 4.0 200 15 BDT 3.1

aInstrument: Applied Biosystems Models 377, 3100, and 3700 sequencers.

bWTR Length: well-to-read length (cm).

cChemistry: Applied Biosystems ABI Prism big dye terminator (BDT) and dGTp big dye terminator ready reaction mixes. Parentheses indicate the ratio of BDT to dGTp.