TABLE 1.
Methylobacterium isolates obtained from the plant phyllospherea
Species (based on 16S rRNA gene sequence)a | Strain | Sequence to which the 16S rRNA gene sequence is identical | Isolation source | ARISA pattern (length[s] of detected fragments [bp])b |
---|---|---|---|---|
M. radiotolerans | F2 | F2 | A. thaliana | 621, 695 |
M. radiotolerans | F9 | F2 | A. thaliana | 629 |
M. radiotolerans | F12 | F2 | A. thaliana | 603, 617, 695 |
M. radiotolerans | F23 | F2 | A. thaliana | 603, 683 |
M. radiotolerans | F47 | F47 | A. thaliana | 603, 617, 639, 652, 696 |
M. thiocyanatum | F53 | F33 | R. pseudoacacia | 593, 608 |
M. thiocyanatum | F18 | F33 | A. thaliana | 605 |
M. thiocyanatum | F33 | F33 | A. thaliana | 592, 606 |
M. thiocyanatum | F19 | F33 | A. thaliana | 589, 611 |
M. thiocyanatum | F34 | F33 | A. thaliana | 592, 606 |
“M. goesingense”c | F36 | F36 | P. reptans | 616 |
M. aminovorans | F13 | F13 | A. thaliana | 588 |
M. extorquens | F46 | F46 | A. thaliana | 602 |
M. mesophilicum | F42 | F42 | H. annuus | 641 |
M. oryzaed | F48 | F48 | A. thaliana | 638 |
Methylobacteriumsp. | F15 | F15 | A. thaliana | 639 |
Methylobacteriumsp. | F1 | F1 | A. thaliana | 627 |
Methylobacterium sp. | F14 | F1 | A. thaliana | 628 |
Methylobacterium sp. | F35 | F1 | P. reptans | 700 |
Methylobacterium sp. | F37 | F1 | P. reptans | 698 |
Methylobacterium sp. | F41 | F1 | P. reptans | 629 |
Methylobacteriumsp. | F38 | F38 | P. reptans | 628 |
Methylobacterium sp. | F39 | F38 | P. reptans | 630 |
Methylobacterium sp. | F40 | F38 | P. reptans | 629 |
Methylobacteriumsp. | F50 | F50 | A. thaliana | 632 |
Methylobacterium sp. | F51 | F50 | A. thaliana | 633 |
Bold type indicates strains that are representative of all strains with identical partial 16S rRNA gene sequences.
Due to methodological variation, slight differences (±2 bp) in the fragment length are possible. Thus, isolates may have identical ARISA patterns even if the lengths of the fragments in the patterns are slightly different.
The most closely related validly described type strain is M. adhaesivum AR27T.
The phylogenetic placement of the strain is not absolutely clear. The levels of 16S rRNA gene sequence identity are 100% with M. oryzae and 99.93% with M. fujisawaense.