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. 2008 Jan 30;46(4):1169–1173. doi: 10.1128/JCM.00856-07

TABLE 1.

Comparison of the VP7 deduced amino acid sequence identities of strains CMP178 and CMP213 with the amino acid sequences of 15 known G genotypes

Strain (origin)a G genotype % VP7 amino acid identityb
CMP178 CMP213
Wa (human) 1 78.2 80.7
Hu/5 (human) 2 72.3 74.1
YO (human) 3 84.6 94.4
AU-1 (human) 3 84.6 95.4
P (human) 3 85.5 95.1
CP-1 (bovine) 3 85.5 96.8
PP-1 (bovine) 3 85.5 96.8
A131 (porcine) 3 85.8 94.7
A138 (porcine) 3 84.9 96.0
4F (porcine) 3 86.1 95.0
Gottfried (porcine) 4 74.5 77.2
OSU (porcine) 5 92.3 86.0
JL49 (porcine) 5 92.6 86.3
H-1 (equine) 5 92.9 86.3
A46 (porcine) 5 92.6 86.7
134/04-15 (porcine) 5 93.2 86.3
NCDV (bovine) 6 81.5 83.5
PO-13 (avian) 7 58.9 56.7
B37 (bovine) 8 78.2 82.5
116E (human) 9 80.9 83.5
B223 (bovine) 10 78.8 81.1
YM (porcine) 11 88.3 86.7
L26 (human) 12 79.4 80.7
L338 (equine) 13 77.6 80.7
CH3 (equine) 14 78.5 84.2
Hg18 (bovine) 15 77.6 77.2
a

The GenBank accession numbers of the VP7 genes are as indicated for the following strains: Wa, K02033; Hu/5, A01028; YO, D86284; AU-1, D86271; P, AB118024; CP-1, AF448852; PP-1, AF427124; Gottfried, X06386; OSU, X04613; JL49, AY538665; H-1, AF242393; A46, L35054; 134/04-15, DQ062572; NCDV, M12394; PO-13, D82979; B37, J04334; 116E, L14072; B223, X57852; YM, M23194; L26, M58290; L338, D13549; CH3, D25229; and Hg18, AF237666.

b

Boldface data indicate percentages of the highest sequence identity that CMP178 and CMP213 shared with the corresponding reference genotypes.