. 2008 Feb 13;82(9):4595–4611. doi: 10.1128/JVI.02588-07

TABLE 2.

Potentially expressed ORFs in GpSGHV

ORF	Position	Length (amino acids)	Intergenic distance (bp)^a	Best BLASTP match							Conserved domain(s) or signature(s)^c
ORF	Position	Length (amino acids)	Intergenic distance (bp)^a	Name, source	Accession no.	Score	E value	Identity (%)	Length (amino acids)	MegAlign identity (%)^b	Conserved domain(s) or signature(s)^c
SGHV001	1>2091	696	7	p74 protein, Spodoptera litura NPV	CAA09849	90	6.E−16	131/656 (19)	657	20.8	TM, baculo-p74
SGHV002	3071<2088	327	−4
SGHV003	3785<3234	183	162
SGHV004	4448<4185	87	399								TM
SGHV005	5439<4378	353	−71	ODV-E66, Epiphyas postvittana nucleopolyhedrovirus	NP_203211	62	2.E−08	46/192 (23)	680	15.3	TM, SP, lyase, Baculo-E66
SGHV006	6576<5491	361	51								DUF676 hydrolase, lipase
SGHV007	6714>7778	354	137
SGHV008	8618<7803	271	24								Y045_METJA 13-219
SGHV009	8631>10871	746	12	Hypothetical protein MAL7P1.132, Plasmodium falciparum 3D7	XP_001349148	50	6.E−04	60/225 (26)	2,041	22.4
SGHV010	14205<10891	1,104	19	ORF MSV156, Melanoplus sanguinipes EPV	NP_048227	67	9.E−09	98/449 (21)	1,127	15.4	Coiled-coil region, kinetochore Spc7
SGHV011	14780<14202	192	−4
SGHV012	15897<14836	353	55
SGHV013	16552<16376	58	478
SGHV014	16895<16719	58	166								TM, SP
SGHV015	17011<16853	52	−43								TM
SGHV016	17068>17436	122	56
SGHV017	18627<17449	392	12								ZFC3HC4 ring
SGHV018	18941>19168	75	313
SGHV019	21510<20179	443	1,010	Hypothetical protein TA04315, Theileria annulata strain Ankara	XP_954808	55	9.E−06	32/131 (24)	791	18.7
SGHV020	23524>24054	176	2,013
SGHV021	25329<24049	426	−6
SGHV022	25337>26368	343	7
SGHV023	26422>27552	376	53								AARP2CN (NUC121) domain SM00785
SGHV024	29113<27557	518	4	Mv-ORF74 peptide, Maruca vitrata MNPV	YP_950804	49	1.E−03	31/103 (30)	224	24.6	TM
SGHV025	29205>29957	250	91
SGHV026	30329>31375	348	371
SGHV027	31398>32774	458	22	Chitinase Chit1 precursor, Glossina morsitans morsitans	AAL65401	226	3.E−57	129/365 (35)	460	33	TM, Glycoside hydrolase family 18 catalytic domain
SGHV028	33269>33862	197	494
SGHV029	33890>34573	227	27								Staphylococcal AgrD protein SM00794
SGHV030	34978<34577	133	3
SGHV031	35917<35060	285	81								HDAC interaction domain, histone deacetylase
SGHV032	36744<35965	259	47
SGHV033	38089<37043	348	298
SGHV034	39187<38138	349	48	ORF AMV 260, Amsacta moorei EPV	NP_065042	44	2.E−02	45/173 (26)	504	19.2
SGHV035	39460<39197	87	9	ORF MSV 238, Melanoplus sanguinipes EPV	NP_048309	57	3.E−07	28/80 (35)	292	33.3
SGHV036	40088<39741	115	280	ORF 67, shrimp white spot syndrome virus thymidylate synthase	NP_477589	62	1.E−08	28/78 (35)	289	37.4
SGHV037	40351<40187	54	98
SGHV038	44374<40850	1,174	498								SP
SGHV039	45446<44439	335	64								TM, SP
SGHV040	45768>48473	901	−1	ORF AMV 130, Amsacta moorei EPV	NP_064912	44	5.E−02	44/141 (31)	1,384	19.1
SGHV041	49765<48524	413	50	ORF MSV 214, Melanoplus sanguinipes EPV, SCG gene family protein	NP_048285	44	2.E−02	61/319 (21)	386	18.2
SGHV042	50183<49809	124	43								TM
SGHV043	50652<50218	144	34								TM
SGHV044	51903<50824	359	171								SP
SGHV045	57046<51860	1,728	−44
SGHV046	57316>58917	533	269								PPASE, inorganic pyrophosphatase signature
SGHV047	58933>60147	404	15	Hypothetical protein CBG22662, Caenorhabditis briggsae	CAE74824	56	4.E−06	57/311 (18)	743	16.6
SGHV048	60195>60986	263	47	ORF 033, Heliocoverpa armigera nucleopolyhedrovirus G4 ADP-pyrophosphatase	NP_075102	59	4.E−07	56/231 (24)	238	18.8
SGHV049	60935>61207	90	−52
SGHV050	61314>62189	291	106
SGHV051	64184<62202	660	12	ORF MSV 152, Melanoplus sanguinipes EPV putative core protein	NP_048223	47	3.E−03	52/218 (25)	1,306	20	TM
SGHV052	65228<64308	306	123	Hypothetical protein, Plasmodium falciparum	XP_001351434	53	2.E−05	69/251 (27)	540	23.9
SGHV053	66323<65241	360	12	Per os infectivity factor 2, Gryllus bimaculatus nudivirus	YP_001111333	66	3.E−09	68/274 (24)	378	21.2	Baculo-44
SGHV054	67507<66473	344	149	ORF AMV 054, Amsacta moorei EPV (putative RNA polymerase-associated transcriptional specificity factor)	NP_064836	45	5.E−03	90/379 (23)	822	29.9
SGHV055	69398<67500	632	−8	ORF AMV253, Amsacta moorei EPV (possible surface protein)	NP_065035	55	1.E−05	100/456 (21)	485	20.6	Internal repeat
SGHV056	69464>70111	215	65
SGHV057	70161>71117	318	49	Rhoptry protein, Plasmodium yoelli yoelli strain 17XNL	XP_725453	57	2.E−06	51/167 (30)	2,664	30.9
SGHV058	71829<71593	78	475								TM, SP
SGHV059	75616<74639	325	2809	RpoD, Plasmodium falciparum	CAA64574	55	5.E−06	74/308 (24)	960	28.9
SGHV060	76249<75623	208	6
SGHV061	77789<76305	494	55
SGHV062	77753>90874	4,373	−37	ORF 147, Tricoplusia ni ascovirus 2c	YP_803369	123	3.E−25	271/1374 (19)	1,481	22.5
SGHV063	92270<90876	464	1								TM, Pfam:CBF, SP
SGHV064	94234<92447	595	176	ORF AMV130, Amsacta moorei EPV (putative ATP-binding cassette transporter)	NP_064912	44	4.E−02	81/354 (22)	1,384	22.4
SGHV065	98511<94246	1,421	11	ORF AMV039, Amsacta moorei EPV (putative ATPase/DNA helicase)	NP_064821	46	2.E−02	72/302 (23)	532	22.8
SGHV066	98557>98877	106	45
SGHV067	99700<98921	259	43
SGHV068	100046<99720	108	19
SGHV069	100917<100105	270	58								TM, SP
SGHV070	102415<101105	436	187
SGHV071	102502>104328	608	86
SGHV072	105120<104311	269	1,808								TM
SGHV073	105372<105133	79	12
SGHV074	105419>107557	712	46	ORF 105, Choristoneura occidentalis GV (helicase-2)	YP_654526	45	1.E−02	25/75 (33)	461	20.6	ATPases
SGHV075	108415<107600	271	−1
SGHV076	108439>109074	211	23	ORF101, Helicoverpa zea single nucleocapsid NPV per os infectivity factor 3	NP_542724	64	4.E−09	38/154 (24)	199	21.9	TM Pfam:DUF666, SP
SGHV077	109141>112320	1,059	66	ORF AMV, 130 Amsacta moorei EPV (putative ATP-binding cassette transporter)	NP_064912	45	4.E−02	80/368 (21)	1,384	17.8
SGHV078	113291<112581	236	260								TM
SGHV079	113342>116203	953	50	Alcelaphine herpesvirus 1 DNA polymerase	NP_065512	240	3.E−61	208/740 (28)	1,026	24.9
SGHV080	116825<116220	201	16								Coiled-coil region
SGHV081	117346<116831	171	5								TM
SGHV082	117839<117360	159	13
SGHV083	119926<117842	694	2	ORF AMV 214, Amsacta moorei EPV	NP_064996	46	7.E−03	69/271 (25)	404	20.8
SGHV084	120018>120677	219	2,175
SGHV085	120898>121665	255	220
SGHV086	121756>123534	592	90
SGHV087	123845<123555	96	20								C2C2 zinc finger
SGHV088	123967>125925	652	121
SGHV089	125940>126482	180	14								Coiled-coil region
SGHV090	126855>127091	78	372								TM
SGHV091	127188>127994	268	96								TM, SP
SGHV092	128014>128265	83	19
SGHV093	128273>129262	329	7								TM
SGHV094	129284>130105	273	21
SGHV095	130116>130589	157	10
SGHV096	130626>131771	381	36								TM, SP
SGHV097	131758>132942	394	−14								TM
SGHV098	132962>133309	115	19
SGHV099	134004<133522	160	212
SGHV100	134769<134335	144	330								TM, SP
SGHV101	134768>135088	106	−2								TM, SP
SGHV102	135141>137099	652	52	Per os infectivity factor 1, Neodiprion abietis nucleopolyhedrovirus	YP_667927	79	1.E−12	92/355 (25)	537	19.4	EGF-like domain, TM, SP
SGHV103	138292<137162	376	62								TM, SP
SGHV104	138341>140323	660	48								TM, coiled-coil region
SGHV105	141381<140503	292	179								Coiled-coil region
SGHV106	142793<141384	469	2								Coiled-coil region, Fib-alpha, fibrinogen alpha chain
SGHV107	144369<142804	521	10	Lymphocystis disease virus isolate China cell division protein 48	YP_073712	67	2.E−09	47/156 (30)	690	20.7
SGHV108	145984<144347	545	−23	Lymphocystis disease virus isolate China cell division protein 48	YP_073712	53	5.E−05	41/162 (25)	690	13.8
SGHV109	147225<146368	285	383								TM, SP
SGHV110	147867<147262	201	36	mp-nase, Spodoptera litura granulovirus	YP_001256988	60	5.E−08	37/104 (35)	464	28.9	TM, zinc-dependent metalloprotease, matrixin signature peptidase_M10
SGHV111	148623<147964	219	96								TM, SP, zinc protease
SGHV112	149132<148629	167	5								TM, SP
SGHV113	149968<149123	281	−10	Hypothetical protein PY00593, Plasmodium yoelli yoelli strain 17XNL	XP_725532	50	2.E−04	58/231 (25)	1647	23.8
SGHV114	150262>151584	440	293	ORF MSV016, Melanoplus sanguinipes EPV (leucine-rich repeat gene family protein)	NP_048087	55	7.E−06	88/377 (23)	572	20.5
SGHV115	151638>152870	410	53
SGHV116	152888>153967	359	17	ORF AMV134, Amsacta moorei EPV (leucine-rich repeat gene family protein)	NP_064916	52	6.E−05	55/236 (23)	535	18.4
SGHV117	154687<153968	239	0	ORF 099L, infectious spleen and kidney necrosis virus	NP_612321	47	1.E−03	19/52 (36)	107	29
SGHV118	154959<154711	82	23								ZF C3HC4 type, ring finger
SGHV119	155648<154995	217	35
SGHV120	155692>156747	351	43
SGHV121	157037>157798	253	289								TM
SGHV122	157992>158342	116	193								TM, SP
SGHV123	159162>159632	156	819								ZnF_C2H2 domain, coiled-coil region
SGHV124	160975>162828	617	1,342	ORF 168, Xestia c-nigrum GV	NP_059316	46	6.E−03	20/63 (31)	198	22.2
SGHV125	163098>163592	164	269	ORF 067, Ecotropis obliqua NPV Cg30	YP_874260	50	6.E−05	35/131 (26)	269	25.9
SGHV126	163629>163937	102	36	ORF 149, Anticarsia gemmatalis NPV pe38-like	YP_803543	44	3.E−03	25/66 v(37)	209	29.4
SGHV127	164989>165237	82	1,051								ZnF_C2H2 domain
SGHV128	165802>166026	74	564
SGHV129	166271>166507	78	244								Coiled-coil region
SGHV130	166702>167232	176	194
SGHV131	167329>169824	831	96	ORF MSV156, Melanoplus sanguinipes EPV	NP_048227	51	4.E−04	114/463 (24)	1,127	19.1
SGHV132	169957>170157	66	132
SGHV133	170364>171623	419	206								EGF-like domain signature 1
SGHV134	171764>172063	99	140
SGHV135	172083>172313	76	19
SGHV136	172640>172804	54	326								Coiled-coil region,
SGHV137	172868>173140	90	63
SGHV138	173153>173515	120	12								Coiled-coil region,
SGHV139	173797>173994	65	281								Coiled-coil region,
SGHV140	174002>175228	408	7								Coiled-coil region,
SGHV141	175407<175141	88	−88								TM
SGHV142	175631>176704	357	223
SGHV143	176745>178037	430	40								Coiled-coil region, DUF572, family of unknown function
SGHV144	179093<178719	124	681	ORF 086, Trichoplusia ni ascovirus 2c	YP_803309	55	1.E−06	25/63 (39)	116	33.6
SGHV145	179383>180018	211	289	Similar to Plasmodium falciparum trophozoite antigen r45-like protein, Danio rerio	XP_001343112	61	4.E−08	64/174 (36)	334	38.5
SGHV146	180034>180669	211	15
SGHV147	181201>181731	176	531	ORF 179, shrimp white spot syndrome virus	NP_477701	45	2.E−03	25/116 (21)	221	19.3
SGHV148	182102>182929	275	370	ORF 179, shrimp white spot syndrome virus	NP_477701	55	3.E−06	41/190 (21)	221	19.9
SGHV149	183239>183601	120	309	Sensory appendage protein 5, Manduca sexta	AAF16716	53	6.E−06	38/113 (33)	231	20.8	Internal repeat
SGHV150	184602<183613	329	11
SGHV151	184795>185043	82	192
SGHV152	185143>185514	123	99
SGHV153	185514>185747	77	−1
SGHV154	185801>186817	338	53
SGHV155	186879>187079	66	61
SGHV156	187447<187274	57	194
SGHV157	187856<187626	76	178
SGHV158	188655<187951	234	94								TM
SGHV159	188579>188788	69	−77
SGHV160	188838>190025	395	49	Possible surface protein AMV253, Amsacta moorei entomopoxvirus	NP_065035	50	2.E−04	68/274 (24)	485	21.5	TM

−, overlap between adjacent ORFs.

Amino acid identity based on MegAlign ClustalW analysis of entire ORFs.

SP, signal peptides; TM, transmembrane domains.