TABLE 2.
Genetic determinants of “Candidatus Cloacamonas acidaminovorans”
| Function | Gene | Gene identifier |
|---|---|---|
| Life in the presence of oxygen | ||
| Superoxide reductase | dfx | Cloam 1366 |
| Ruberythrin | rbr | Cloam 1367 |
| Rubredoxin | rub | Cloam 1368 |
| Peroxiredoxin | ahpC | Cloam 1564 |
| Thioredoxin | trx | Cloam 0816 |
| Thioredoxin reductase | trxB | Cloam 1697 |
| Rubredoxin-oxygen oxidoreductase or nitric oxide reductase (putative) | fprA | Cloam 1876 |
| Class II ribonucleotide reductase (putative) | Cloam 0913 | |
| Anaerobic lifestyle | ||
| Class III ribonucleotide reductase | nrdD | Cloam 1253 |
| Class III ribonucleotide reductase-activating enzyme | nrdG | Cloam 1254 |
| Pyruvate ferredoxin oxidoreductase | por | Cloam 0324 |
| 2-Ketoglutarate ferredoxin oxidoreductase | korC | Cloam 0295 (γ-subunit) |
| korB | Cloam 0296 (β-subunit) | |
| korA | Cloam 0297 (α-subunit) | |
| korD | Cloam 0298 (δ-subunit, putative) | |
| Aldehyde ferredoxin oxidoreductase, tungsten containing | aorB | Cloam 0708 |
| aorA | Cloam 0709 | |
| Branched-chain ketoacid ferredoxin oxidoreductase | vorD | Cloam 1001 (δ-subunit) |
| vorC | Cloam 1004 (γ-subunit) | |
| vorB | Cloam 1003 (β-subunit) | |
| vorA | Cloam 1002 (α-subunit) | |
| Indolepyruvate ferredoxin oxidoreductase | iorB | Cloam 1037 (β-subunit) |
| iorA | Cloam 1038 (α-subunit) | |
| Energy | ||
| Fe-only hydrogenase | hymC | Cloam 1180 (α-subunit) |
| hymB | Cloam 1183 (β-subunit) | |
| hymA | Cloam 1186 (γ-subunit) | |
| Fe-only hydrogenase, assembly protein | hydEF | Cloam 0448 |
| hydG | Cloam 0921 | |
| Methylmalonyl-CoA decarboxylase (putative) | Cloam 1768 (α-subunit) | |
| Cloam 1770 (γ-subunit) | ||
| Cloam 1771 (β-subunit) | ||
| ATP synthase | Cloam 1052 (subunit A1) | |
| Cloam1053 (subunit B1) | ||
| Cloam 1054 (subunit D) | ||
| Cloam 1055 (subunit I, putative) | ||
| Cloam 1056 (subunit K, putative) | ||
| Pyrophosphate-energized proton pump | hppA | Cloam 1022 |