TABLE 1.
Strains and plasmids
Strain or plasmid | Relevant genotype or characteristicsa | Source or reference |
---|---|---|
E. coli strains | ||
XL1-Blue | recA1 endA1 gyrA96 thi-1 hsdR17 supE44 relA1 lac [F′ proAB lacIqZΔM15 Tn10(Tcr)] | Stratagene |
S17.1 | thi pro hsdR recA RP4-2 (Tc::Mu) (Km::Tn7) | 39 |
P. aeruginosa strains | ||
PAO1 | Wild type | 42 |
PA103 | Wild type | 22 |
PA103 pilA | PA103 ΔpilA::Gmr; Gmr | 47 |
pilA | PAO1 ΔpilA | 6 |
fliC | PAO1 ΔfliC::Tcr; Tcr | 6 |
fliC pilA | PAO1 ΔfliC::Tcr ΔpilA; Tcr | 6 |
fliC pilA | PAO1 ΔfliCΔpilA | This work |
fliC pilA gacA | PAO1 ΔfliC::Tcr ΔpilA gacA::Tn<Gmr>; Tcr Gmr | This work |
fliC pilA gacA | PAO1 ΔfliCΔpilA gacA::Tn<Gmr>; Gmr | This work |
fliC pilA gacS | PAO1 ΔfliC::Tcr ΔpilA gacS::Tn<Gmr>; Tcr Gmr | This work |
fliC pilA retS | PAO1 ΔfliC::Tcr ΔpilA retS::Tn<Gmr>; Tcr Gmr | This work |
fliC pilA gacA attB::pilA | PAO1 ΔfliC ΔpilA gacA::Tn<Gmr> attB::pilA; Gmr | This work |
fliC pilA rhlA | PAO1 ΔfliC::Tcr ΔpilA ΔrhlA; Tcr | This work |
Plasmids | ||
pX1918G | Cloning/expression vector; Gmr | 36 |
pMOD2<MCS> | Epicentre | |
pMOD<Gmr> | aacC1-xylE cassette cloned at MCS of pMOD2<MCS> | This work |
mini-CTX2 | Contains attP site for integration at P. aeruginosa chromosomal attB site; Tcr | 13 |
mini-CTX-pilA | pilA under control of its own promoter in mini-CTX2 | This work |
pUCP-KS | Shuttle vector; Apr Cbr | 46 |
pRhlA | rhlA under control of the Plac promoter in pUCP-SK; Apr Cbr | This work |
pEX18 Gm | Suicide vector; Gmr; sacB | 13 |
pEX18-ΔpilA | pilA knockout construct in pEX18 Gm; Gmr; sacB | 6 |
pEX18-ΔfliC | fliC knockout construct in pEX18 Gm; Gmr; sacB | This work |
pMQ30 | Suicide vector; sacB; Gmr URA3 CEN6/ARSH4 | 37 |
pKO-rhlA | rhlA knockout construct in pMQ30; Gmr; sacB | This work |
pMQ80 | Cloning vector; Gmr URA3 PBAD; araC | 37 |
pBifA | His-tagged bifA under control of the PBAD promoter in pMQ80; Gmr URA3 | 18 |
pSadC | C-terminal HA-tagged sadC under control of the PBAD promoter in pMQ80; Gmr URA3 | 26 |
Abbreviations: Ap, ampicillin; Cb, carbenicillin; Gm, gentamicin; Tc, tetracycline; Km, kanamycin.