Table 1.
Library | Tissue/sex/stage | Vector used | No. of clones | Average length (bp) | %"N" | No. of clusters |
AA | Abdomen, female, 0–1 day | ZAP | 609 | 589.7 | 0.014 | 435 |
AB | Abdomen, female, 0–1 day | ZAP | 1027 | 601.9 | 0.011 | 667 |
AC | Abdomen, male, 0–1 day | ZAP | 588 | 599.7 | 0.022 | 493 |
AD | Abdomen, male, 0–1 day | ZAP | 967 | 594.9 | 0.102 | 726 |
EA | Egg, 0–1.5 day | pGEM | 3726 | 652.0 | 0.051 | 2371 |
EB | Egg, 3–5 day | pGEM | 2055 | 576.3 | 0.076 | 941 |
HA | Head, female, 0–1 day | ZAP | 777 | 520.6 | 0.018 | 111 |
HT | Head-thorax, male, 0–1 day | ZAP | 2555 | 673.9 | 0.070 | 1132 |
MA | Midgut, female, 0–5 day | pGEM | 3594 | 637.5 | 0.051 | 1252 |
MB | Midgut, male, 0–5 day | pGEM | 2095 | 606.4 | 0.117 | 847 |
NA | Whole nymph, 1st instar | pGEM | 3269 | 633.8 | 0.096 | 1714 |
NB | Whole nymph, 4th instar | ZAP | 3710 | 624.7 | 0.058 | 1749 |
OA | Ovary, 0–1 day | ZAP | 967 | 511.5 | 0.119 | 689 |
OB | Ovary, 4–5 day | ZAP | 822 | 601.9 | 0.028 | 329 |
OC | Ovary, 4–5 day | ZAP | 2225 | 604.4 | 0.079 | 989 |
SG | Salivary glands, female, 0–5 day | pGEM | 2383 | 640.8 | 0.083 | 723 |
TA | Testis, 0–1 day | ZAP | 1525 | 575.9 | 0.045 | 895 |
TH | Thorax, 0–1 day | ZAP | 4228 | 693.1 | 0.029 | 1657 |
Total | 37122 | 626.7 | 0.065 | 10261 |
ZAP, lambda ZAP II (pBluescript) phage vector; pGEM, pGEM-t plasmid vector; %"N", percentage of ambiguous nucleotides. Ovary and testis includes the accessory glands of the reproductive organs. Clustering was performed using CLOBB [25]. ESTs are deposited in the DNA databases under accession numbers DB20956–DB858077 (37,122 entries).