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. 2008 Mar 25;9:140. doi: 10.1186/1471-2164-9-140

Table 1.

Selected parameter settings for round one in the primer design process.

Primer length 18 – 22 nucleotides
Product length 80 – 120 nucleotides
Primer melting temperature 58.0 – 60.0 °
Max. primer melting temperature diff. 2.0 °
Enforce G/C terminal Yes
G/C content 40.0 – 60.0%
Max. base repeat 2 (e.g., GGG in a primer is disallowed)
Force specificity for both primers Yes (i.e., none of the two primers has a perfect alignment to a non-target)