Table 1.
The significant tags with higher expression by Significant Analysis for Microarray between the West and the East tumor SAGE libraries. Only the tags that were successfully associated with a specific gene are shown. The tags are sorted in a significance descending order, first the tags highly expressed in the East and then those highly expressed in the West.
Tags | Gene Symbol | Protein Name | N° of West libraries where present | West tumor average (Tags per 200,000) | N° of East libraries where present | East tumor average (Tags per 200,000) |
TGATTGGTGG | PDGFRA | Platelet-derived growth factor receptor, alpha polypeptide | 3 | 1.88 | 3 | 115.05 |
GGCTGGGTTT | HLX1 | H2.0-like homeo box 1 (Drosophila) | 2 | 1.04 | 3 | 59.13 |
TCCGTCCGGA | RPL13 | Ribosomal protein L13 | 3 | 1.36 | 3 | 39.56 |
ATCTGGAGCA | ADH1C | Alcohol dehydrogenase 1C (class I), gamma polypeptide | 3 | 5.99 | 3 | 294.91 |
TGCTCCTACC | FCGBP | Fc fragment of IgG binding protein | 4 | 4.91 | 3 | 111.10 |
TACCCTGGAA | ADH4 | Alcohol dehydrogenase 4 (class II), pi polypeptide | 3 | 3.35 | 3 | 56.30 |
AGGTCTGCCA | AKR1C2 | Aldo-keto reductase family 1, member C2 (dihydrodiol dehydrogenase 2; bile acid binding protein; 3-alpha hydroxysteroid dehydrogenase, type III) | 3 | 1.53 | 3 | 38.50 |
GCACCACCGG | MAPK13 | Mitogen-activated protein kinase 13 | 0 | 0 | 3 | 10.62 |
GGAGGGGAGG | MECR | Mitochondrial trans-2-enoyl-CoA reductase | 1 | 0.55 | 3 | 15.72 |
CTTCCTTGCC | KRT17 | Keratin 17 | 7 | 220.64 | 0 | 0 |
TAATTTGCAT | EMP1 | Epithelial membrane protein 1 | 7 | 43.26 | 0 | 0 |
TAAGGCTTAA | KLK10 | Kallikrein 10 | 7 | 20.35 | 0 | 0 |
TGGAAATGAC | COL1A1 | Collagen, type I, alpha 1 | 7 | 294.99 | 2 | 14.36 |
TGGATGTACA | CCDC12 | Coiled-coil domain containing 12 | 7 | 21.69 | 0 | 0 |