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. 2008 Mar 26;9(Suppl 2):S9. doi: 10.1186/1471-2105-9-S2-S9

Table 1.

The ESTree db statistics on sequences. Comparison of the main statistics on the ESTree db version VI, compared with the previously described version III.

ESTree III ESTree VI
Total nr of seq 18,630 75,404
Total nr of contigs 2,328 7,709
Average alignment depth 5 7.1
Total nr of singletons 6,891 20,682
Total nr of unigenes 9,219 28,391
In-house produced seq 6,157 10,847
Total almond seq - 3,864
Total peach seq 18,630 71,540
Pp mesocarp seq 18,630 55,996
Pp skin seq - 4,690
Pp shoot seq - 7,085
Pp leaf seq - 3,769
NCBI annotated seq (%) 70.4 78.6
GO annotated seq (%) 49.9 69.7
Genomic annotated seq (%) - 26.8
Repeats-containing seq (%) - 16
Putative SNP-containing seq (%) 12.7 22.9
PROSITE patterns-containing seq (%) - 18
Mapped sequences - 0.75
Seq associated to microarray data (%) - 6.2
Metabolic pathways-associated seq (%) 1,8 0.62