Primers used in the microsatellite survey
Locus | Repeat | Forward primer 5′-3′/reverse primer 5′-3′ |
---|---|---|
C. elegans dimers | ||
C18F3 | (GT)14 | AAGGGCATGAGGAGAAGTCAACGGGAGCAGCTCTCGTTCTGATTGC |
F10C2 | (GT)26 | GCTCCACTTTTCAACATCCTTCCTTGTCCCCGCTATTTCGCTC |
F32B5 | (GT)34 | GCACTTTTCCAACAAAAAAATCCGCCCACACGAGACATGCAATAACTACC |
W01A6 | (GA)45 | CCCCCGAATCTCATTTCAGTTGTTAGCACCCTTCCGTTTTCACGCC |
F59D12 | (GT)59 | ACCCCAATGGACTACGTTGTGCACGTGACGCCTTTGGTTCATAG |
F16A11 | (GT)68 | CTTCTTCTTCTTCCTCCGACCGCAGAGGGGGTGATCTTTATGCC |
F09F3 | (GT)107 | GCAATCCTACGGTACACCCATACCCGTATTTTGACATTAGGCAGGTGC |
K06G5 | (GT)142 | AGCTTGAGGAAGAAGGTGGGGTGTTCGTCCATTTGAGCACC |
T08H4 | (GT)191 | TGGCTCATCACTTGTGTTCAACCCGGCTCCTCTCTGATTTGTCTG |
C. elegans trimers | ||
C27D9 | (AAT)12 | AATCGTCGTCGGAACTCAGATAAGGCAAGTGTTGAGGCAAACAGAAG |
K08D12 | (ACC)12 | GAACGTGCATCAAGTGTAATTCGCTGGCACCCGATATGTGTGAAG |
E02A10 | (GGA)13 | GTAGCAAGAGCCGAAAGCTGAGTGTCAAGCCTACACCACCACTAGC |
F47B8 | (GGA)13 | GCTCCTCCAGAATATCCAGCTTCCTATGGTCTGCTCGATCAGTTGTG |
C24A3 | (TTC)13 | CGCATCTTCTTTTCGGAGCAAGTCATCCTCCTTCCAACACTGCC |
R01E6 | (TTC)14 | TCCCCTCGTAATTCCCAAAATCCCAAAAGGAGATGCAGAAGAGTAGG |
F10E7 | (CAA)15 | ACCAAAGTCAACCCGACTACAGCTCGAGTGTGATGCGAACAGTTG |
C03H5 | (AAT)28 | AACAAAAATGTGGCAGGGAGGGGTTACGGTAGTGGTACTGTAGG |
F35H10 | (GTA)30 | CGCTCAGAACCATGTTTAAGATTTCCTTTTATGAGTAACTTTGGTGCAGG |
C. elegans tetramers | ||
C03B1 | (ATGG)17 | GAATCTGTTCTTCCTTCCTTCGCCGTTCTCCTTTTATCATCAAC |
C16C8 | (TAGG)19 | TCCTGCCTACCTGCCCATTAGGGCGTGCAGACATAAGATAGG |
C43B7 | (TAGG)26 | GATGCAGACAAAAATACCGAGAGGGACTAATCACCCACAAACCGAAAC |
C13B7 | (TAGG)28 | CAAAGTTAGCAAGAACCCAGTTGGTCGCACCTACCTACACCCTTTCTG |
B0564 | (AAAT)43 | GACCATTAGATGAATTTCCCGAGCAACAGAATTTTTAC |
D. pulex dimers | ||
P17D02 | (GA)13 | CCGAATGTCTAACCCACACCTGCACATATTGCCCGTGTAT |
P17C11 | (GT)15 | ACGGTAGCGGTATTGGAAGATGCAGCGATTCAAATAATGG |
P17C09 | (GA)15 | GTATGGGCCGGCTAAGGATAGGAATTTGGCGCATCGAG |
P17C08 | (GA)16 | CCGTCTCCAACCAATTCACTTAAACTTCGGGGACCTTGTG |
P17B12 | (GA)19 | TCCCGGTTTATCACAGTTCCGCAAAAATCGCAGGTTTCTC |
P17B11 | (GA)20 | TAACAAGTGGCTGCATCCTGCAGAGGAGGTAACGCAAAGG |
P17A09 | (GA)26 | CGTCCATCATGACTTGGATCTCACCATGAGTGAAAGCCAGA |
P17A07 | (GT)27 | AGAGTGAAGGCAGGAAACCACGGAGACGACCAAGGTGTA |
P17A02 | (GA)30 | TTATTCATGTACGCCCGTTGGCAGTGCTGTCCTGTGAGAC |
P17A01 | (GA)30 | TCATGTACGCCCGTTGTAAAGCCATGGACGTGACGTATAA |
P16H07 | (GA)34 | GCACGTGACACATTTGAAGCGTTCAGCACGAAAATGACGA |
P16H05 | (GA)34 | AGCCGTACCTGTGATGTGTGACGAGCAATACACGATGACG |
P16H03 | (GA)34 | TGAACGAGGGGAAAATCAAAAACCTGCTCTTCACGACGAC |
P16G10 | (GA)35 | CTGAGAGCGAGACCGACAGCGACATGGATGATGTTGAGG |
P16F10 | (GA)36 | GGTGTATCATTTTTGATTGAATTTTCTAGTCGCATTTGCGCCTTT |
P16F02 | (GA)37 | AGTCTGGAGAGCCAAAGCAGCTCGTCGACCATGAGAACAA |
P16F01 | (GA)38 | ATTCGAACCGACGGAAAACTCAACGGCAGTGGCAATACTA |
P16E08 | (GA)38 | CAACGGATGGTGGAATAACCTCCGCGTAGCCTCATAGAAT |
P16E09 | (GA)38 | CTCGGGAAGGTTTCAGACAGACCCAAAAGAGCGAGGAACT |
P16C05 | (GA)44 | GATTCGAACCACCCAACTGTGTGGGGTACTCAGCGAAAGA |
P16C06 | (GA)44 | CCGAGAGCTTCTCACTGCTTACGAAATCGATCCCTCTTCC |
P16B10 | (GA)47 | CAAGTGGGCGTGTACAACAGTGTCAGCGCGTCTAGAGAAA |