Table 1.
Residue | Structure | % Surface | H-bond | kint (h−1)a | ΔGop |
Class I | |||||
Phe 12 | helix 1 | 0 | 8 Thr O | 36165 | 6.4 |
Val 16 | helix 1 | 4.4 | 12 Phe O | 4150 | 4.7 |
Lys 18 | helix 1 | 15.7 | — | 30783 | 6.1 |
Lys 36 | helix 2 | 25.2 | 33 Gly O | 177134 | 7.5 |
Ala 46 | helix 2 | 7.1 | 42 leu O | 32223 | 7.0 |
Leu 103 | helix 4 | 0 | 99 Leu O | 16531 | 8.8 |
Asp 104 | helix 4 | 17.5 | 100 Lys O | 16916 | 7.1 |
Class II | |||||
Ile 23 | β strand 2 | 0 | 81 Phe O | 10191 | 9.1 |
Leu 24 | β strand 2 | 0 | 54 Thr O | 8478 | 9.3 |
Asp 26 | β strand 2 | 0.1 | 56 Ala O | 19875 | 7.9 |
Phe 27 | β strand 2 | 0 | 77 Thr O | 20811 | 9.6 |
Trp 28 | β strand 2 | 0 | 58 Leu O | 8478 | 9.2 |
Ala 29 | β strand 2 | 0 | — | 42490 | 8.7 |
Thr 54 | β strand 3 | 0 | — | 28724 | 7.8 |
Val 55 | β strand 3 | 5.2 | — | 17308 | 9.8 |
Ala 56 | β strand 3 | 0 | 24 Leu O | 39654 | 10.0 |
Leu 58 | β strand 3 | 0 | 26 Asp O | 18979 | 6.6 |
Ile 60 | β strand 3 | 16 | 28 Trp O | 21297 | 9.5 |
Leu 78 | β strand 4 | 0 | 90 Lys O | 22820 | 7.3 |
Leu 79 | β strand 4 | 0 | 25 Val O | 8877 | 9.0 |
Leu 80 | β strand 4 | 0 | 88 Ala O | 8877 | 9.2 |
Phe 81 | β strand 4 | 0.6 | 23 Ile O | 19422 | 9.8 |
Ile 41 | helix 2 | 0 | — | 5864 | 5.6 |
Leu 42 | helix 2 | 0 | 38 Ile O | 8478 | 6.1 |
a Values of kint were determined from model-peptide data, as described by Bai et al. 1993.