Table 1.
Comparison of E. histolytica, H. sapiens and S. cerevisiae RAD52 epistasis group proteins
Entamoeba histolytica | Homo sapiens | Saccharomyces cerevisiae | |||||||||||||
Predicted protein | Size (aa) | GeneBank ID | Locus name a | Protein | Accession number b | Size (aa) | e-value | H (%) | I (%) | Protein | Accession number b | Size (aa) | e-value | H (%) | I (%) |
EhMRE11 | 596 | XM_651393 | EHI_125910 | MRE11 | P49959 | 708 | 3e-49 | 51 | 32 | MRE11 | P32829 | 692 | 1e-33 | 45 | 26 |
EhMRE11-like | 223 | XM_644963 | EHI_077650 | MRE11 | P49959 | 708 | 3e-23 | 51 | 25 | MRE11 | P32829 | 692 | 2e-20 | 49 | 27 |
EhRAD50 | 1241 | XM_647783 | EHI_079960 | RAD50 | Q92878 | 1312 | 2e-44 | 40 | 23 | RAD50 | P12753 | 1312 | 2e-43 | 46 | 27 |
EhNBS1 | 764 | XM_647447 | EHI_098770 | NBS1 | Q6IQ31 | 754 | 0.0022 | 40 | 24 | XRS2 | P33301 | 854 | e+3 | 28 | 17 |
EhRAD51 | 367 | XM_648984 | EHI_031220 | RAD51 | Q06609 | 339 | e-125 | 83 | 71 | RAD51 | P25454 | 400 | 2e-43 | 78 | 60 |
EhRAD51C | 284 | XM_619126 | EHI_122860 | RAD51C | Q433502 | 376 | 3e-17 | 51 | 28 | RAD57 | P25301 | 460 | e-109 | 47 | 27 |
- | - | - | RAD51B | O15315 | 350 | - | - | - | RAD55 | P38953 | 406 | - | - | - | |
- | - | - | RAD51D | O75771 | 289 | - | - | - | - | - | - | - | - | - | |
- | - | - | XRCC2 | O43543 | 280 | - | - | - | - | - | - | - | - | - | |
- | - | - | XRCC3 | O43542 | 346 | - | - | - | - | - | - | - | - | ||
EhRAD52 | 243 | XM_648599 | EHI_188230 | RAD52 | P43351 | 418 | 2e-35 | 71 | 48 | RAD52 | P06778 | 504 | 1e-23 | 57 | 38 |
EhRAD54 | 885 | XM_648260 | EHI_103840 | RAD54 | Q92698 | 747 | e-115 | 58 | 41 | RAD54 | P32863 | 898 | e-106 | 56 | 37 |
EhRAD54B | 765 | XM_645236 | EHI_114930 | RAD54B | Q9Y620 | 910 | e-130 | 52 | 36 | RDH54 | P32863 | 920 | e-114 | 55 | 39 |
EhRAD59 (EhRAD52/22a) | 190 | XM_651011 | EHI_112840 | - | - | - | - | - | - | RAD59 | Q12223 | 238 | 2e-08 | 45 | 25 |
a E. histolytica Pathema datatabase
b Swiss-Prot/TrEMBL databases
I, identity; H, homology