Skip to main content
. 2008 Mar 17;9:128. doi: 10.1186/1471-2164-9-128

Table 2.

Genes of three E. coli regulons sampled using the mean SOS minus one standard deviation (Cutoff values are shown in parenthesis in the leftmost column.)

Regulon Gene SOS Product
FruR (0.1) purB 0.44 adenylosuccinate lyase
fruA 0.69 PTS family enzyme IIB'BC, fructose-specific
fruB 0.69 PTS family enzyme IIA (N-terminal); FPr (C-terminal), fructose-specific
fruK 0.69 fructose-1-phosphate kinase
icda 0.54 e14 prophage; isocitrate dehydrogenase, specific for NADP+
aceB 0.12 malate synthase A
aceA 0.12 isocitrate lyase
setB 0.23 lactose/glucose:proton efflux pump
glk 0.15 glucokinase
epd 0.46 D-erythrose 4-phosphate dehydrogenase
yibO 0.14 phosphoglycerate mutase III
aroP 0.17 aromatic amino acid transport protein
tpiA 0.46 triosephosphate isomerase
pfkA 0.46 6-phosphofructokinase I

NtrC (0.11) glnG 0.55 NtrC regulator
glnL 0.55 histidine protein kinase sensor for NtrC regulator
glnA 0.71 glutamine synthetase
glnH 0.11 high-affinity glutamine transport protein
glnK 0.31 nitrogen regulatory protein P-II 2
amtB 0.31 probable ammonium transporter

PurR (0.09) codB 0.1 cytosine permease
codA 0.1 cytosine deaminase
tsx 0.12 nucleoside channel
purK 0.37 phosphoribosylaminoimidazole carboxylase (CO2 fixating subunit)
purE 0.37 phosphoribosylaminoimidazole carboxylase (catalytic subunit)
prsA 0.1 phosphoribosylpyrophosphate synthetase
purR 0.1 repressor for purine nucleotide synthesis
purT 0.71 phosphoribosylglycinamide formyltransferase 2
purF 0.48 amidophosphoribosyltransferase
cvpa 0.48 membrane protein required for colicin V production
upp 0.35 uracil phosphoribosyltransferase
purC 0.18 phosphoribosylaminoimidazole-succinocarboxamide synthetase
purM 0.38 phosphoribosylaminoimidazole synthetase
purN 0.38 phosphoribosylglycinamide formyltransferase 1
glyA 0.22 serine hydroxymethyltransferase
purL 0.42 phosphoribosylformyl-glycineamide synthetase
yfhD 0.42 putative periplasmic binding protein of transport system
gltS 0.15 glutamate transport
yicE 0.33 putative purine/xanthine transport protein
purH 0.47 IMP cyclohydrolase (N-terminal); phosphoribosylaminoimidazolecarboxamide formyltransferase (C-terminal)
purD 0.47 phosphoribosylglycinamide synthetase