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Alignment of porA Variant Sequences for VR2 Family P1.1
| VR2 family | DNA sequence |
|---|---|
| 1-0 | TGGAAAATGGCG TAGCTAAAAAAGTTG CGGCTGTTGTCG |
| 1-1 | TGGAAAATGGCG TAGTTAAAAAAGTTG CGGCTGTTGTCG |
| 1-2 | TGGAAAATGGCGCAACTAAAAAAGTTG CGGCTGTTGTCG |
| 1-3 | TGGAAAATGGCG TAGCTAAAAAAGTTACGGCTGTTGTCG |
Nucleotides that do not match the reference sequence (1-0) are marked in bold type and the conserved 12-nucleotide sequences flanking the variable regions are underlined.
