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. 2008 May 7;2(5):e231. doi: 10.1371/journal.pntd.0000231

Table 4. Frequency of TLR1 haplotypes in reversal reaction.

6 SNP Haplotypes1 Reversal Reaction OR (95% CI) P3
No Yes
TATTAT 441 (37.8) 155 (38.1) 1.00
TATTGT 356 (30.5) 116 (28.5) 0.93 (0.70–1.22) 0.68
CGCCGT 259 (22.2) 105 (25.8) 1.15 (0.86–1.54) 0.46
TATTAG 82 (7.1) 16 (3.9) 0.55 (0.31–0.97) 0.05
TACTGT 26 (2.2) 15 (3.7) 1.64 (0.85–3.17) 0.15
CGCCGG 2 (0.1) 0 (0.0) 0.25 (0.00–51.20) 0.58
2 SNP Haplotypes 2
TT 808 (68.0) 272 (66.4) 1.00
CT 294 (24.7) 122 (29.7) 1.23 (0.95–1.58) 0.18
TG 83 (7.0) 16 (3.8) 0.56 (0.32–0.97) 0.05
CG 3 (0.3) 0 (0.1) 0.41 (0.02–10.61) 0.58
1

Order for 6 SNP haplotypes, left to right: Trs5743563C, Ars5743565G, Trs5743592C, Trs5743595C, G743A, T1805G.

2

Order for 2 SNP haplotypes: Trs5743592C, T1805G.

3

P value represents comparison of a given haplotype with the reference haplotype TATTAT.