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. 2008 Mar 28;9:147. doi: 10.1186/1471-2164-9-147

Table 3.

GO terms that are over represented in one member of a species pair

Species pair Generic GO Slim Ontology (GO) Term Species with over-represented GO terms
M. grisea/N. crassa electron transport M. grisea
M. grisea/N. crassa transport
M. grisea/N. crassa generation of precursor metabolites and energy
M. grisea/N. crassa catalytic activity

F. graminearum/T. reesei transport F. graminearum
F. graminearum/T. reesei transporter activity
F. graminearum/T. reesei electron transport
F. graminearum/T. reesei generation of precursor metabolites and energy
F. graminearum/T. reesei catalytic activity

F. graminearum/T. reesei cytoplasm T. reesei
F. graminearum/T. reesei lysosome
F. graminearum/T. reesei Intracellular
F. graminearum/T. reesei cellular component organization and biogenesis
F. graminearum/T. reesei organelle

A. nidulans/S. nodorum DNA Binding A. nidulans
A. nidulans/S. nodorum transcription regulator activity
A. nidulans/S. nodorum transcription
A. nidulans/S. nodorum regulation of biological process
A. nidulans/S. nodorum nucleus
A. nidulans/S. nodorum nucleobase nucleoside nucleotide and nucleic acid
A. nidulans/S. nodorum metabolic process
A. nidulans/S. nodorum nucleic acid binding
A. nidulans/S. nodorum cytoplasm
A. nidulans/S. nodorum intracellular
A. nidulans/S. nodorum catalytic activity
A. nidulans/S. nodorum electron transport
A. nidulans/S. nodorum generation of precursor metabolites and energy
A. nidulans/S. nodorum organelle

A. nidulans/S. nodorum peptidase activity S. nodorum
A. nidulans/S. nodorum catabolic process
A. nidulans/S. nodorum antioxidant activity
A. nidulans/S. nodorum extracellular region

P. chrysosporium/U. maydis electron transport P. chrysosporium
P. chrysosporium/U. maydis carbohydrate binding
P. chrysosporium/U. maydis extracellular region
P. chrysosporium/U. maydis response to abiotic stimulus
P. chrysosporium/U. maydis generation of precursor metabolites and energy
P. chrysosporium/U. maydis nucleic acid binding
P. chrysosporium/U. maydis nucleotide binding
P. chrysosporium/U. maydis catalytic activity
P. chrysosporium/U. maydis protein complex
P. chrysosporium/U. maydis peptidase activity
P. chrysosporium/U. maydis multicellular organismal development
P. chrysosporium/U. maydis amino acid and derivative metabolic process
P. chrysosporium/U. maydis reproduction
P. chrysosporium/U. maydis catabolic process

Enrichment in pathogens and non-pathogens across four different pairwise comparisons