Effects of osmolyte on ADP release and nucleotide binding.
A, the rapid-quench-flow apparatus was used to measure: (i)
pre-steady state kinetic experiments in the absence (•) and in the
presence of 5% (w/v) PEG-8000 (○) and (ii) catalytic trapping experiments
in the absence (▴) and in the presence of 5% (w/v) PEG-8000 (▵).
For pre-steady state kinetic experiments, free enzyme from one sample loop was
reacted at 25 °C with ATP and Tide from the other sample loop. The
concentrations after mixing were [E] = 2 μm with [ATP]
and [Tide] = 200 μm. For catalytic trapping experiments, enzyme
preincubated with ADP from one sample loop was reacted at 25 °C with ATP
and Tide from the other sample loop. The concentrations after mixing were
[E] = 2 μm with [ADP], [ATP], and [Tide] = 200
μm. The curves for pre-steady state (•) and catalytic
trapping (▴) in the absence of 5% (w/v) PEG-8000 were generated with the
kinetic constants in Table 2.
The curves for pre-steady state (○) and catalytic trapping (▵) in the
presence of 5% (w/v) PEG-8000 were generated with the kinetic constants in
Table 2, but with 2-fold
increased values of k–1 and k+5.
B, the radiometric filter-binding assay was used to measure
equilibrium binding of enzyme (0.5 μm) at 25 °C (i) with
varying concentrations of [8-14C]ATP (∼500 cpm/pmol, and 1, 2,
3, 5, 10, 25, and 50 μm) in the absence (•) and in the
presence of 5% (w/v) PEG-8000 (○) and (ii) varying concentrations of
[8-14C]ADP (∼500 cpm/pmol; and 1.5, 2.5, 4, 7.5, 17.5, 37.5,
and 62.5 μm) in the absence (▴) and in the presence of 5%
(w/v) PEG-8000 (▵). The curves were generated by direct fitting of the
data to Equation 7. In each case,
the limiting amount of bound nucleotide approximately equaled the amount of
enzyme, indicating one nucleotide binding site (i.e. C ∼
[Etot] = 0.5 μm).