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. 2008 Mar 10;76(5):1970–1978. doi: 10.1128/IAI.00714-07

TABLE 1.

Oligonucleotides used in this study

Oligonucleotide designation Sequence (5′-3′) Function Reference
A GGCCATGGGAAGAAGGAG Amplification of ospD and flanking regions This study
B CAATCCTATTACTGCGGG Amplification of ospD and flanking regions This study
C AGATCTGATGGAAGTAAGGAAGGAAGa Inverse PCR for construction of suicide vector This study
D AGATCTTATTTATACTCCTTAAATATAATGTCa Inverse PCR for construction of suicide vector This study
E CACCGTTCATGATAAACAAGAATTATCb Amplification of ospD for expression in E. coli This study
F AGTATTTAACAAGGCCACAAC Amplification of ospD for expression in E. coli This study
G AGAAGCGGTTATAAATGCAGTT ospD forward QPCR primer This study
H TCTGCCATTTGAGCTAAATCAT ospD reverse QPCR primer This study
I AATTTCATCTGCTGCAGATCAAGTAAAAAGTGc ospD QPCR probe This study
flaB FWD TCTTTTCTCTGGTGAGGGAGCT flaB forward QPCR primer 23
flaB REV TCCTTCCTGTTGAACACCCTCT flaB reverse QPCR primer 23
flaB PROBE AAACTGCTCAGGCTGCACCGGTTCc flaB QPCR probe 23
J ACGGATTCTAATGCGGTTTTACTT ospC forward QPCR primer This study
K CAATAGCTTTAGCAGCAATTTCATCT ospC reverse QPCR primer This study
L CTGTGAAAGAGGTTGAAGCGTTGCTGTCATc ospC QPCR probe This study
M GATCATGTTCGAGACCTTCA Tick actin forward QPCR primer 28
N CGATACCCGTGGTACGA Tick actin reverse QPCR primer 28
O CCATCCAGGCCGTGCTCTCc Tick actin QPCR probe 28
a

The BglII restriction enzyme sequence is underlined.

b

Underlined nucleotides were added for directional cloning in the expression vector.

c

TaqMan probes were labeled at the 5′ end with FAM (6-carboxyfluorescein) and at the 3′ end with TAMRA (6-carboxytetramethylrhodamine).