Table 3.
Selected, miscellaneous cold-responsive genes.
Probeset ID | Potato best match and annotation | Avg. signal 17°C | Avg. signal 4°C | Fold change | adj.P.Val |
Les.4223.1.S1_at | TA28833_4113 Alternative oxidase 1au (Solanum lycopersicum) |
4.79 | 330.56 | 69.21 | 0.00189 |
Les.3967.1.S1_at | TA32068_4113 Omega-3 desaturase (Solanum tuberosum) |
18.98 | 471.64 | 24.84 | 0.00129 |
LesAffx.23510.1.S1_at | TA42248_4113 PvLEA-18 (Phaseolus vulgaris) |
12.66 | 140.28 | 11.01 | 0.00298 |
Les.5956.1.S1_s_at | TA23754_4113 Cold-stress inducible protein (CI7) (Solanum tuberosum) |
130.33 | 1406.81 | 10.88 | 0.00276 |
Les.3273.1.S1_at | BM113620 Cold acclimation protein WCOR518 (Triticum aestivum) | 49.42 | 448.51 | 9.00 | 0.00321 |
Les.5011.1.S1_at | TA35430_4113 Temperature-induced lipocalin (Solanum tuberosum) |
120.12 | 895.12 | 7.45 | 0.00239 |
Les.3341.1.S1_at | TA24917_4113 Copper-zinc superoxide dismutase (Solanum tuberosum) |
2079.22 | 5038.78 | 2.41 | 0.01200 |
Les.3691.1.S1_at | TA30474_4113 Mitochondrial uncoupling protein (Solanum tuberosum) |
33.01 | 75.79 | 2.30 | 0.01080 |
Les.5957.1.S1_at | TA36769_4113 Cold acclimation protein WCOR413-like protein beta form (Arabidopsis thaliana) |
375.55 | 711.09 | 1.89 | 0.02172 |
Signals are the averages of two biological replicates (avg. signal) for both control (17°C) and cold stress (4 days at 4°C) and fold changes represent the ratios of stress to control average signals. Further details are as described in Table 2.