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. 2007 Jun 19;97(2):260–266. doi: 10.1038/sj.bjc.6603850

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Copyright © 2007 Cancer Research UK

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Hierarchical clustering of data for 24 tumours obtained from clones in the MCG Cancer Array-800. The data are presented in a matrix format. Each column corresponds to a single tumour, and each row corresponds to a single clone ordered by mapping position. Gain or loss of a clone is represented by the colour of the cells in the matrix (green indicates gain, black is no change, and red means loss). Colour saturation is proportional to the magnitude of the difference. The sidebars to the left of the matrix format represent a chromosome cluster ordered from chromosome 1 to Y. The horizontal dendrogram shows that the associations between tumours and the length of the branches reflect the extent of similarity between tumours. Note that each tumour from a particular patient is more closely related to other tumours from the same patient than to any tumours from the other patients.