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. 2006 Jul 25;95(4):525–531. doi: 10.1038/sj.bjc.6603272

Table 1. Details of SNPs used in the analyses.

Gene Label db SNPa MAFb Location Codon number Amino acidc
CAT CAT-01 rs1001179 0.22 Regulatory 0  
CAT CAT-03 rs769217 0.22 Silent 389 D>D
CAT CAT-04 rs511895 0.42 Intronic 0  
CAT CAT-05 rs7104301 0.26 Regulatory 0  
CAT CAT-08 rs1049982 0.32 5′UTRd 0  
GPX1 GPx1-01 rs3448 0.25 Intergenic    
GPX4 GPx4-02 rs713041 0.46 3′UTR 0  
GPX4 GPx4-04 rs4807542 0.16 Silent 12 P>P
GPX4 GPX4-06 rs757229 0.46 Intergenic 0  
GSR GSR-01 rs1002149 0.16 Regulatory 0  
GSR GSR-07 rs4628224 0.19 Intronic 0  
GSR GSR-12 rs8190924 0.05 Intronic 0  
GSR GSR-14 rs2978663 0.37 Intronic 0  
GSR GSR-16 rs8191009 0.20 Intronic 0  
GSR GSR-18 rs3926402 0.39 Intronic 0  
GSR GSR-19 rs2911678 0.22 Intronic 0  
SOD1 SOD1-01 rs4998557 0.12 Intronic 0  
SOD1 SOD1-02 rs202445 0.17 Regulatory 0  
SOD1 SOD1-03 rs2070424 0.07 Intronic    
SOD2 SOD2-02 rs1799725 0.49 Missense 16 V>A
SOD2 SOD2-05 rs2842958 0.21 Intronic 0  
TXN TRX1-02 rs1410051 0.24 Intronic 0  
TXN TRX1-03 rs4135168 0.26 Intronic 0  
TXN TRX1-05 rs4135192 0.33 Intronic 0  
TXN TRX1-06 rs2418076 0.27 Intronic 0  
TXN TRX1-07 rs4135208 0.33 Intronic 0  
TXN TRX1-08 rs4135211 0.07 Intronic 0  
TXN TRX1-09 rs4135225 0.33 Intronic 0  
TXN TRX1-10 rs2776 0.50 3′UTR 0  
TXN TRX1-11 rs2301241 0.41 5′UTR 0  
TXN TRX1-12 rs4135165 0.09 Intronic 0  
TXN TRX1-13 rs4135172 0.08 Intronic 0  
TXN TRX1-14 rs4135179 0.23 Intronic 0  
TXN TRX1-15 rs4135215 0.16 Intronic 0  
TXN TRX1-16 rs4135221 0.13 Intronic 0  
TXN2 TRX2-01 rs2281082 0.19 Intronic 0  
TXN2 TRX2-03 rs8139906 0.18 Intronic 0  
TXN2 TRX2-04 rs8140110 0.09 Intronic 0  
TXNRD1 TRXR1-01 rs4964778 0.18 Intronic 0  
TXNRD1 TRXR1-02 rs4964779 0.12 Intronic 0  
TXNRD1 TRXR1-03 rs4564401 0.07 Intronic 0  
TXNRD1 TRXR1-04 rs10861201 0.23 Intronic 0  
TXNRD2 TRXR2-01 rs2073752 0.28 Missense 370 T>I
TXNRD2 TRXR2-03 rs5748469 0.33 Missense 66 S>A
TXNRD2 TRXR2-04 rs756661 0.47 Intronic 0  
TXNRD2 TRXR2-05 rs2020917 0.28 Intronic 0  
TXNRD2 TRXR2-07 rs740603 0.46 Intergenic 0  
TXNRD2 TRXR2-08 rs4485648 0.20 Intronic 0  
TXNRD2 TRXR2-09 rs732262 0.09 Intronic 0  
TXNRD2 TRXR2-10 rs1548357 0.27 Intronic 0  
TXNRD2 TRXR2-11 rs2073750 0.21 Intronic 0  
TXNRD2 TRXR2-12 rs3788306 0.30 Intronic 0  
a

db: rs number for each SNP which uniquely identifies it.

b

MAF: minor allele frequency.

c

Labels for amino acids: aspartic acid (D); proline (P); valine (V); alanine (A); threonine (T); isoleucine (I); serine (S).

d

UTR: untranslated region.