Table 1. mtDNA changes detected in the entire sequence of Control 1, 2 and UC-Case 1–3.
Control 1 | Control 2 | UC-Case 1 | UC-Case 2 | UC-Case 3 | ||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Position | Gene | Change | Position | Gene | Change | Position | Gene | Change | Position | Gene | Change | Position | Gene | Change |
248 | D-loop | del A | 741 | 12SrRNA | A → G | 191 | D-loop | del A | 500 | D-loop | del C | 1074 | 12SrRNA | ins C |
2472 | 16SrRNA | del A | 2687 | 16SrRNA | del C | 200 | D-loop | A → C | 514 | D-loop | del CA | 1080 | 12SrRNA | ins C |
3969 | ND1 | C → T | 6479 | COI | ins A | 490 | D-loop | A → C | 751 | 12SrRNA | A → G | 2036 | 12SrRNA | ins C |
4769 | ND2 | A → G | 8639 | ATPase6 | T → C | 1000 | 12SrRNA | T → A | 2686 | 16SrRNA | G → C | 3106 | 12SrRNA | del C |
6392 | COI | T → C | 8850 | ATPase6 | A → G | 1438 | 12SrRNA | A → G | 4386 | Q | T → C | 4032 | ND1 | del CC |
9053 | ATPase6 | G → A | 8860 | ATPase6 | A → G | 1486 | 12SrRNA | C → G | 4769 | ND2 | A → G | 4919 | ND2 | ins T |
10 309 | ND3 | T → A | 11 720 | ND4 | G → A | 3010 | 12SrRNA | G → A | 4958 | ND2 | A → G | 5101 | ND2 | C → T |
10 590 | ND4L | T → G | 15 326 | Cyt.b | A → G | 3285 | L | T → G | 5895 | COI | ins C | 6179 | COI | G → A |
11 947 | ND4 | A → C | 3338 | ND1 | T → G | 6455 | COI | C → T | 6456 | COI | G → A | |||
11 955 | ND4 | A → C | 4662 | ND2 | A → G | 7337 | COI | G → A | 7904 | COII | ins G | |||
4768 | ND2 | T → G | 7852 | COII | G → A | 7917 | COII | ins G | ||||||
4883 | ND2 | C → T | 8861 | ATPase6 | C → G | 8021 | COII | ins A | ||||||
5178 | ND2 | C → T | 10 999 | ND4 | C → G | 8483 | ATPase8 | A → T | ||||||
5942 | COI | A → G | 11 084 | ND4 | A → G | 8494 | ATPase8 | A → T | ||||||
9860 | COIII | T → G | 11 102 | ND4 | ins G | 8684 | ATPase6 | C → T | ||||||
9883 | COIII | T → G | 11 771 | ND4 | C → G | 8860 | ATPase6 | A → G | ||||||
11 853 | ND4 | C → T | 11 853 | ND4 | C → T | 9540 | COIII | T → C | ||||||
11 247 | ND4 | C → G | 12 417 | ND5 | C → T | 9572 | COIII | C → T | ||||||
11 457 | ND4 | C → G | 12 705 | ND5 | C → T | 10 027 | ND3 | ins G | ||||||
11 712 | ND4 | C → G | 13 586 | ND5 | C → T | 10 873 | ND4 | T → C | ||||||
11 719 | ND4 | G → A | 13 768 | ND5 | T → C | 11 335 | ND4 | T → C | ||||||
11 956 | ND4 | C → T | 14 364 | ND6 | G → A | 12 705 | ND5 | C → T | ||||||
14 570 | ND6 | C → G | 14 783 | Cyt.b | T → C | 14 783 | Cyt.b | T → C | ||||||
16 147 | D-loop | C → T | 15 043 | Cyt.b | G → A | 15 043 | Cyt.b | G → A | ||||||
16 245 | D-loop | C → T | 16 209 | D-loop | T → C | 16 184 | D-loop | C → T | ||||||
16 298 | D-loop | T → C | ||||||||||||
16 319 | D-loop | G → A | ||||||||||||
16 524 | D-loop | ins G |
ND=NADH (reduced nicotinamide adenine dinucleotide) dehydrogenase; CO=cytochrome c oxidase; ATPase, ATP synthase; Cyt b, cytochrome b.
F, V, L, I, Q, M, W, A, N, C, Y, S, D, K, G, R, H, E, T, and P=tRNAs for phenylalanine, valine, leucine, isoleucine, glutamine, methionine, tryptophan, alanine, asparagine, cysteine, tyrosine, serine, aspartate, lysine, glycine, arginine, histidine, glutamate, threonine, and proline, respectively.
ins=insertion; del=deletion.