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. 2005 Jul 26;93(3):355–363. doi: 10.1038/sj.bjc.6602707

Table 2. PCR primers and parameters.

Gene Forward (5′–3′) Reverse (5′–3′) Product size (bp) Number of cycle Annealing condition
EGFR
 Exon 18 TACACCCAGTGGAGAAGCTCC CCCCACCAGACCATGAGAG 169 30 58°C, 30 s
 Exon 19 CAATTGCCAGTTAACGTCTTCC GGAGATGAGCAGGGTCTAGAG 239 30 58°C, 30 s
 Exon 20 CACACTGACGTGCCTCTC CTTATCTCCCCTCCCCGTA 252 30 56°C, 30 s
 Exon 21 AGGGCATGAACTACTTG CCTCCTTACTTTGCCTCCTTC 167 35 55°C, 30 s
 
p53
 Exon 5 TTCAACTCTGTCTCCTTCCT CAGCCCTGTCGTCTCTCCAG 248 30 55°C, 30 s
 Exon 6 GCCTCTGATTCCTCACTGAT TTAACCCCTCCTCCCAGAGA 181 30 55°C, 30 s
 Exon 7 CTTGCCACAGGTCTCCCCAA TGTGCAGGGTGGCAAGTGGC 196 30 59°C, 30 s
 Exon 8 TTCCTTACTGCCTCTTGCTT CGCTTCTTGTCCTGCTTGCT 201 30 55°C, 30 s
 
K-ras ACTGAATATAAACTTGTGGTAGTTGGACCT CTGTATCAAAGAATGGTCCTGCACCAGTA 162 30 58°C, 30 s
 
p16
 Unmethylated TTATTAGAGGGTGGGGTGGATTGT CAACCCCAAACCACAACCATAA 151 35 60°C, 30 s
 Methylated TTATTAGAGGGTGGGGCGGATCGC GACCCCGAACCGCGACCGTAA 150 35 65°C, 15 s
 
RASSF1A
 Methylated GGGTTTTGCGAGAGCGCG GCTAACAAACGCGAACCG 169 35 64°C, 50 s
 
APC1A
 Methylated TATTGCGGAGTGCGGGTC TCGACGAACTCCCGACGA 98 35 62°C, 10 s