Table 3.

Matching parameters of genotypes and subgroups with probes used on the AT microarray (numbers represent mismatches)

Probe category	ABE:VD2-a			ABE:VD2-b		ABE:VD2-c		ABE:VD2-d				ABE:VD4-b			ABE:VD4-c			ABE:VD4-d				CDFRY:VD2-b			CDFRY:VD2c		CDFRY:VD4-c		CDRFY:VD4-d		CF:VD4-a		M56:VD2-c	WC:VD2-a	WC:VD4-a
Probe	VD2-02	VD2-03	VD2-04	VD2-12	VD2-15	VD2-24	VD2-25	VD2-31	VD2-32	VD2-33	VD2-34	VD4-11	VD4-12	VD4-13	VD4-21	VD4-22	VD4-24	VD4-31	VD4-32	VD4-33	VD4-35	VD2-11	VD2-13	VD2-14	VD2-21	VD2-23	VD4-23	VD4-25	VD4-34	VD4-36	VD4-02	VD4-03	VD2-22	VD2-01	VD4-01
Type
A-VS1	0;1					2;3	0;1	0;1	1;2	1;2		0	1	1	0	2	1		3	0	2
A-6BC	0					1	1	1	0	1		0	1	1	0	2	1		3	0	2
A-8455	0					2	0	0	1	1		0	1	1	0	2	1		0	3
B		0	1	0		1	1	1	0	1		1	0	1	1	1	0		3	0	2
EB-E30		1	0		0	0	2				0	1	0	1	1	1	0			2	0
EB-KKCP		0	1	1		2	2	1	0	1		1	0	1	1	1	0		3	0	2
EB-859		1	0	1	3	1	1	1	0	1		1	0	1	1	1	0			2	0
E		1	0		0	0	2				0	2	1	2	2	0	1	0		3	2
C																								0;2							0
D-NJ1																										0				0
D-9N																										4
F																									0				0			0
R54																							0				0
YP84																						0						0
Mat116		2	2	2		2	0	0	1	1		0	1	1	0	2	1			1	1
M56								1	1	0		0	1	1	0	2	1		3	0	2												0
WC																																		0	0
1V					13
6N																										2