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. Author manuscript; available in PMC: 2008 May 2.
Published in final edited form as: J Biol Chem. 1998 Aug 7;273(32):20615–20621. doi: 10.1074/jbc.273.32.20615

Table II. Sequence of the SMIT TonEs.

Sequencing of the small DNA fragments S14-c, S14-g, and S31-d (Fig. 2) revealed seven TonE sequences that conform to the consensus shown near the bottom. TonEB2 and TonEB3 overlap in reverse directions sharing 10 bp as follows: TGGAAAATTCCA, where TonEB2 is in bold letters and the complementary strand of TonEB3 is underlined. TonEp (p for proximal) is at the −331/−321 position. Taking active SMIT TonEs into consideration, an updated TonE consensus is derived (shown at the bottom). Y represents C or T; N represents A, G, C, or T.

Name Location Sequences Remarks
TonEA S14-c TGGAAAACTAC
TonEB1 S14-g TGGAATTCTAT Not active
TonEB2 S14-g TGGAAAATTCC Overlap with TonEB3
TonEB3 S14-g TGGAATTTTCC Probably not active
TonEC1 S31-d TGGAAAATTAC Same as “hTonE”
TonEC2 S31-d TGGAAAGTTAC
TonEC3 S31-d TGGAACTCCCT Not active
TonEp −331/−321 TGGAAAGTTCC
Consensus YGGAANNNYNY Ref. 22
Updated consensus TGGAAANNYNY