Table 2.
Organism | miRNA | Validated targets | Recovered targets | Potential novel targets |
C. elegans | cel-miR-273 | 2 | 2 | 0 |
C. elegans | cel-let-7 | 15 | 15 | 1708 |
C. elegans | cel-miR-84 | 7 | 7 | 123 |
D. melanogaster | dme-miR-11 | 4 | 4 | 0 |
D. melanogaster | dme-miR-2 | 4 | 4 | 0 |
D. melanogaster | dme-miR-4 | 8 | 8 | 23 |
D. melanogaster | dme-miR-7 | 15 | 15 | 28 |
M. musculus | mmu-miR-124 | 3 | 3 | 0 |
M. musculus | mmu-miR-206 | 3 | 3 | 0 |
H. sapiens | hsa-miR-1 | 4 | 4 | 0 |
H. sapiens | hsa-miR-122 | 3 | 3 | 0 |
A. thaliana | ath-miR-163 | 5 | 5 | 0 |
A. thaliana | ath-miR-172 | 6 | 6 | 0 |
A. thaliana | ath-miR-390 | 1 | 1 | 0 |
A. thaliana | ath-miR-398 | 2 | 2 | 0 |
A. thaliana | ath-miR-408 | 2 | 3 | 1 |
"miRNA" gives miRBase miRNA identifier; "Validated targets" gives number of unique validated targets present in the starting alignment; "Recovered targets" gives number of validated targets in the input alignment that were recovered; "Predicted novel targets" gives number of candidate target sequences (other than the validated targets) predicted by the SBM method.