Table 1.

Relationship between the minor genotype count and number of significant associations without the filtering of SNPs on genotype counts

Minor genotype count	No. SNPs	No. hits	Max. no. hits by a single SNP	Avg. no. hits per SNP
1	103	1054	200	10.23
2	55	333	147	6.05
3–6	166	508	48	3.06
7–10	56	107	12	1.91
11–15	52	85	9	1.63
16–20	42	56	4	1.33
21–30	45	65	5	1.44
>30	51	74	6	1.45