Table 1.

Ranks of candidate genes among 9187 SNPs across 22 chromosomes based on five ranking methods, sorted by chromosome and location

			Rank
Chr	Location (bp)	Diffa	Z0	Z1/2	Z1	min p	MERT
6	32447149	37 kb	4	4	4	3	4
6	32499465	14 kb	2	2	2	1	2
6	32521277	36 kb	3	3	3	2	3
6	32772203	387 kb	5	5	5	4	5
6	36900959	330 kb	966	1190	2028	1881	647
6	37363880	130 kb	8172	6	6	6	10
6	37539191	300 kb	6359	1430	464	931	2897
6	37657759	423 kb	968	1341	4671	1884	1414
8	140606402	3.2 mb	3012	4237	5775	5167	3328
8	140676097	3.1 mb	8391	7443	7097	8726	7382
8	140679773	3.1 mb	7936	7288	7096	8727	7225
8	142073109	1.7 mb	8918	6991	6588	8459	7407
9	25996861	262 kb	2921	4074	6290	5039	3556
9	26089466	169 kb	2179	9009	4702	3930	6948
9	26484252	225 kb	2374	2254	4205	3889	2291
9	26521692	262 kb	2909	2113	2819	3677	1947
9	27418665	118 kb	3667	3963	6458	5915	4070
9	27505967	31 kb	6228	7286	8222	8279	7989
9	27697461	160 kb	5582	7177	5317	7490	8915
9	27697600	160 kb	5195	4841	3323	5329	7532
11	110204257	30 kb	1	1	1	5	1
11	110259778	24 kb	3492	3162	4276	5125	2930
11	110264385	29 kb	271	222	857	419	186
11	110322303	87 kb	6840	3492	1930	3411	3030
16	12527182	9 kb	7729	4194	4148	6328	4884
16	12577812	60 kb	4288	5913	4696	6589	8924
16	12618035	100 kb	6212	7783	8356	8266	6771
16	12783679	266 kb	5824	4802	5334	7101	4733
18	65844474	225 kb	6522	4959	5282	7254	4864
18	66045171	24 kb	7063	8720	9182	8750	7913
18	66048927	20 kb	15	15	15	15	13
18	66230498	160 kb	5441	6135	6872	7732	5409

^aDiff is the distance to the closest candidate gene