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. 2008 Apr 25;9(Suppl 4):S10. doi: 10.1186/1471-2105-9-S4-S10

Figure 5.

Figure 5

Running time of approximate queries on a molecules database. The database contains 8000 molecules, it is available at [13]. Nodes labeled with a special wildcard symbol “?” can match any label; a wavy segment indicates an approximate path of any length (here the wildcard “*” representing an approximate path has been substituted with a wavy segment only for a graphical purpose). Query Q1 searches for a node (atom) C and a node N connected through a path. Query Q2 searches for a node (atom) C and a node N connected through a single node. As expected, the number of occurrences of Q1 is greater than those of Q2. In each graph, a query may have a large number of occurrences (in 27 candidate graphs, Q3 has 5372 matches).