Table 2.
Comparison of GldA to various ABC transporters
Protein | Organism | Similarity score | % amino acid identity with GldA | Function | Ref. |
---|---|---|---|---|---|
Sll0489 | Synechocystis PCC6803 | 694 | 50% identity over 222 residues | Unknown | 26 |
BcrA | Bacillus licheniformis | 554 | 32.9% identity over 295 residues | Resistance to the peptide antibiotic bacitracin | 27 |
MtrA | Streptomyces argillaceus | 496 | 34.2% identity over 260 residues | Resistance to the polyketide antibiotic mithramycin | 28 |
NosF | Rhizobium meliloti | 478 | 38.4% identity over 216 residues | Cu processing/transport (for nitrous oxide reduction) | 29 |
NodI | Bradyrhizobium japonicum | 475 | 34.8% identity over 221 residues | Oligosaccharide export (involved in nodulation) | 30 |
NisF | Lactococcus lactis | 474 | 37% identity over 219 residues | Resistance to peptide antibiotic nisin | 31 |
EpiF | Staphylococcus epidermidis | 422 | 34.6% identity over 205 residues | Resistance to the peptide antibiotic epidermin | 32 |
CysA | Synechococcus PCC7942 | 412 | 33.5% identity over 212 residues | Uptake of sulfate | 33 |
Proteins were aligned with GldA and the similarity scores were determined using the lalign program (22).