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. 2002 Mar;11(3):558–570. doi: 10.1110/ps.33502

Table 1.

Kinetic and equilibrium constant governing binding of BirA variants to biotin and bio-5`-AMPa

Variant/ ligand koff (s−1) kon(M−1 s−1) KD(M)
biotin
wt 0.33 (±0.01) 7.4 (±0.3) × 106 4.5 (±0.2) × 10−8
G115S 80 (±20) 9 (±2) × 106 9 (±3) × 10−6
R118G 29 (±5) 1.6 (±0.2) × 107 1.8 (±0.4) × 10−6
R119W 0.49 (±0.04) 2.2 (±0.2) × 106 2.5 (±0.3) × 10−7
bio-5`-AMP
wt 0.00027 (±0.00003) 6.0 (±0.6) × 106 4.5 (±0.7) × 10−11
G115S 0.84 (±0.03) 7.0 (±0.7) × 106 1.2 (±0.1) × 10−7
R118G 0.119 (±0.006) 6 (±1) × 106 2.0 (±0.3) × 10−8
R119W 0.00009 (±0.00001) 4.9 (±0.2) × 106 1.8 (±0.2) × 10−11

a All parameters were previously reported in Kwon and Beckett (2000). The equilibrium dissociation constants (KD) were calculated from the measured unimolecular dissociation rate constants (koff) and bimolecular association rate constants (kon) using the equation Inline graphic. Parameters were determined in Standard Buffer (10 mM TrisHCl, pH 7.50 ± 0.02, 200 mM KCl, 2.5 mM MgCl2 at 20.0 ± 0.1°C).