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. 2008 Feb 23;64(Pt 3):156–162. doi: 10.1107/S1744309108001413

Table 3. Coordination of the two Mg2+ ions.

Bridging atoms are highlighted in bold. Mean distances from structures in the PDB at near-atomic resolution are 2.09 Å for Mg2+—OH2, 2.10 Å for Mg2+—O Thr, 2.08 Å for monodentate Mg2+OOC Asp/Glu and 2.5 Å as the maximal accepted distance of bidentate Mg2+OOC Asp/Glu (Harding, 2001, 2006). The two coordinating atoms of the Mg-II ion that differ by more than 50% from the mean distance are indicated in italics. Values for the deviation of the mean distance assuming a bidentate coordinating nature are given in parentheses.

Coordinating atom Distance (Å) Deviation from mean distance (%)
Mg-I    
 Thr60 OG1 2.32 +10.5
 Asp61 OD1 2.03 −2.4
 Asp62 OD2 1.93 −7.2
Asp300 OD2 2.01 −3.4 (19.6)
 W20 2.10 +0.5
W61 2.02 −3.3
Mg-II    
 Glu25 OE2 2.26 +8.7
 Asp298 OD1 2.17 +4.3 (13.2)
Asp298 OD2 3.42 +64.4 (36.8)
 Asp300 OD1 2.20 +5.8 (12.0)
Asp300 OD2 3.16 +51.2 (26.4)
 Thr301 OG1 2.32 +10.5
 W38 2.27 +8.6
W61 2.23 +6.7