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. 2008 Feb 26;9(2):R43. doi: 10.1186/gb-2008-9-2-r43

Table 3.

Tilled genes and mutation density in Caméor mutant population

Tilled genes Amplicon size (bp) % of GC in exons Identified mutants Screened M2 families Mutation frequency
Ps CONSTANS-like a (PsCOLa) 1,012 46.30% 11 1,536 1/141 Kb
LectineA 971 40.80% 13 1,536 1/115 Kb
Sucrose transporter (SUT1) 1,014 52.40% 12 1,536 1/130 Kb
Cell wall invertase (cwINV) 1,612 41.50% 12 1,536 1/206 Kb
Serine-threonine proteine kinase (Sym29) 2,457 44.00% 8 768 1/236 Kb
Phosphoenolpyruvate carboxylase (PepC) 1,009 44.40% 25 3,072 1/124 Kb
Lec1-like (L1L) 870 39.10% 21 4,608 1/191 Kb
DOF transcription factor 2 (PsDOF2) 1,200 36.60% 9 3,072 1/410 Kb
Trypsine inhibitor (TI1) 712 34.20% 13 3,840 1/210 Kb
Pea albumine (PA2) 746 38.50% 9 3,072 1/255 Kb
Anther specific protein (End1) 851 40.50% 31 3,072 1/84 Kb
MADS box gene (PM10) 1,302 34.60% 20 4,608 1/300 Kb
MADS box gene (PM2) 1,390 31.30% 28 4,608 1/229 Kb
Tendril-less transcription factor (TL) 1,104 34.00% 28 3,072 1/121 Kb
Eukaryotic translation initiation factor (eiF4e) 1,383 36.90% 36 4,608 1/177 Kb
Eukaryotic translation initiation factor (eIF(iso)4e) 772 36.70% 10 4,608 1/356 Kb
Methyl transferase 1 (Met1) 3,842 40.20% 96 4,704 1/188 Kb
Retinoblastoma related (RBR) 2,959 40.80% 72 4,608 1/112 Kb
Late embryogenesis abundant protein (PsLEAM) 952 44.00% 17 4,608 1/258 Kb
Heat shock protein 22 (HSP22) 622 45.66% 18 4,608 1/159 Kb
Total/mean 26,780 40.12% 467 - 1/200 Kb

Part or all of the Caméor mutant population was screened for mutations in the genes listed. The size of the screened amplicon, the number of mutants identified and the mutation frequency for each amplicon are indicated. The average mutation frequency was estimated to one mutation per 200 kb and is calculated as in Greene et al. [6], except that we have summed the sizes of all the amplicons and we divided by the total number of identified mutants.