Table 1.
Source | Protein subset | Number of proteins | Number of singletons | Q |
SwissProt | Monomers | 137 | 87 | 0.6350 |
Homo-oligomers + monomers | 596 | 333 | 0.5587 | |
Hetero-oligomers | 407 | 228 | 0.5602 | |
Mid-to-large complexes (homotrimer and above) | 334 | 197 | 0.5898 | |
1 external interaction | 641 | 342 | 0.5335 | |
>1 external interaction | 125 | 75 | 0.5000 | |
Arifuzzaman et al. 2006 [9] | 1 external interaction | 371 | 193 | 0.5202 |
>1 external interaction | 1,916 | 1,049 | 0.5475 | |
Ragan 2001 [11] | LGT due to atypical nucleotide composition | 568 | 339 | 0.5968 |
Beiko et al. 2005 [13] | LGT by Bayesian phylogenetic analysis | 987 | 607 | 0.6150 |
PEC database | Essential genes | 233 | 173 | 0.7425 |
E. coli average | 4,308 | 2,382 | 0.5529 |